G2078419


Basic Information

Item Value
gene id G2078419
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 36077473 ~ 36077693 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2376346
cacaaaaatatgagccttaggtcattaatatggtcaaatccggaaactatcatttcgaaaacaaaacgtttattctttcagtgaaatacagaaccgttccatattttatctaacgggtggcatccataagtctaaatattgctgttacattgcacaacctttattgttatttcataattttgtacaattctggcaaattaattgcGGTcgttgttaggaag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2376346 True 221 lncRNA 0.33 1 36077473 36077693

Neighbor

gene id symbol gene type direction distance location
LOC110507977 fzd4 coding upstream 65139 36005425 ~ 36012334 (+)
LOC110507976 LOC106581370 coding upstream 254589 35804534 ~ 35822884 (+)
LOC110507975 LOC106581363 coding upstream 558364 35465699 ~ 35519109 (+)
LOC110507973 LOC106581395 coding upstream 913014 35156006 ~ 35164459 (+)
gucy1a2 LOC106581392 coding upstream 966431 35014631 ~ 35111042 (+)
naalad2 LOC106581411 coding downstream 287962 36365655 ~ 36381011 (+)
LOC110508005 LOC106613226 coding downstream 360532 36438225 ~ 36440709 (+)
LOC110507218 LOC106591049 coding downstream 376068 36453761 ~ 36546497 (+)
LOC118944683 NA coding downstream 533042 36610735 ~ 36618726 (+)
LOC118936607 LOC106581404 coding downstream 601080 36678773 ~ 36703523 (+)
G2078416 NA non-coding upstream 2783 36074005 ~ 36074690 (+)
G2078351 NA non-coding upstream 79082 35998053 ~ 35998391 (+)
G2078347 NA non-coding upstream 85010 35992169 ~ 35992463 (+)
G2078346 NA non-coding upstream 85896 35991363 ~ 35991577 (+)
G2078331 NA non-coding upstream 113990 35963194 ~ 35963483 (+)
G2078420 NA non-coding downstream 553 36078246 ~ 36078521 (+)
G2078423 rab38 non-coding downstream 22671 36100364 ~ 36100648 (+)
G2078426 LOC106590903 non-coding downstream 28851 36106544 ~ 36106845 (+)
G2078427 NA non-coding downstream 29473 36107166 ~ 36107986 (+)
G2078428 NA non-coding downstream 30365 36108058 ~ 36108619 (+)
G2078382 NA other upstream 43474 36033285 ~ 36033999 (+)
G2078296 NA other upstream 144964 35932115 ~ 35932509 (+)
G2078253 NA other upstream 205740 35870485 ~ 35871733 (+)
G2078188 NA other upstream 279483 35797572 ~ 35797990 (+)
G2078087 NA other upstream 384640 35684135 ~ 35692833 (+)
G2078425 NA other downstream 25181 36102874 ~ 36104101 (+)
G2078493 NA other downstream 223245 36263506 ~ 36302664 (+)
LOC110536894 NA other downstream 1195793 37031161 ~ 37276857 (+)
G2079197 NA other downstream 1201412 37279105 ~ 37280832 (+)

Expression


Co-expression Network