Gene
RNA
| Item | Value |
|---|---|
| gene id | G2078416 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048591.1 |
| NCBI id | CM023245.2 |
| chromosome length | 51556237 |
| location | 36074005 ~ 36074690 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2376343 | True | 686 | lncRNA | 0.47 | 1 | 36074005 | 36074690 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110507977 | fzd4 | coding | upstream | 61671 | 36005425 ~ 36012334 (+) |
| LOC110507976 | LOC106581370 | coding | upstream | 251121 | 35804534 ~ 35822884 (+) |
| LOC110507975 | LOC106581363 | coding | upstream | 554896 | 35465699 ~ 35519109 (+) |
| LOC110507973 | LOC106581395 | coding | upstream | 909546 | 35156006 ~ 35164459 (+) |
| gucy1a2 | LOC106581392 | coding | upstream | 962963 | 35014631 ~ 35111042 (+) |
| naalad2 | LOC106581411 | coding | downstream | 290965 | 36365655 ~ 36381011 (+) |
| LOC110508005 | LOC106613226 | coding | downstream | 363535 | 36438225 ~ 36440709 (+) |
| LOC110507218 | LOC106591049 | coding | downstream | 379071 | 36453761 ~ 36546497 (+) |
| LOC118944683 | NA | coding | downstream | 536045 | 36610735 ~ 36618726 (+) |
| LOC118936607 | LOC106581404 | coding | downstream | 604083 | 36678773 ~ 36703523 (+) |
| G2078351 | NA | non-coding | upstream | 75614 | 35998053 ~ 35998391 (+) |
| G2078347 | NA | non-coding | upstream | 81542 | 35992169 ~ 35992463 (+) |
| G2078346 | NA | non-coding | upstream | 82428 | 35991363 ~ 35991577 (+) |
| G2078331 | NA | non-coding | upstream | 110522 | 35963194 ~ 35963483 (+) |
| G2078295 | NA | non-coding | upstream | 141979 | 35931812 ~ 35932026 (+) |
| G2078419 | NA | non-coding | downstream | 2783 | 36077473 ~ 36077693 (+) |
| G2078420 | NA | non-coding | downstream | 3556 | 36078246 ~ 36078521 (+) |
| G2078423 | rab38 | non-coding | downstream | 25674 | 36100364 ~ 36100648 (+) |
| G2078426 | LOC106590903 | non-coding | downstream | 31854 | 36106544 ~ 36106845 (+) |
| G2078427 | NA | non-coding | downstream | 32476 | 36107166 ~ 36107986 (+) |
| G2078382 | NA | other | upstream | 40006 | 36033285 ~ 36033999 (+) |
| G2078296 | NA | other | upstream | 141496 | 35932115 ~ 35932509 (+) |
| G2078253 | NA | other | upstream | 202272 | 35870485 ~ 35871733 (+) |
| G2078188 | NA | other | upstream | 276015 | 35797572 ~ 35797990 (+) |
| G2078087 | NA | other | upstream | 381172 | 35684135 ~ 35692833 (+) |
| G2078425 | NA | other | downstream | 28184 | 36102874 ~ 36104101 (+) |
| G2078493 | NA | other | downstream | 226248 | 36263506 ~ 36302664 (+) |
| LOC110536894 | NA | other | downstream | 1198796 | 37031161 ~ 37276857 (+) |
| G2079197 | NA | other | downstream | 1204415 | 37279105 ~ 37280832 (+) |
