G2078426 (LOC106590903)


Basic Information

Item Value
gene id G2078426
gene name LOC106590903
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 36106544 ~ 36106845 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2376353
ACCTGCTATGTCCCATAACTGTAGCCGAACAGTCTCTTGGTCCCAATTAAGGACCTTCAGGGCGAAGTCCACTCCTATCGTGGCCCGGTAGTTGGGGCTGAAGTTCTGGTGAACATAGCGCTTGATGATGCTAGTCTTCCCCACCCCCAGGTCCCCTATTACCAGGATCTTATAGAGGTGCTCCTTGTAGTTGTTCTGCATGGCGACCGCGGAGCGCTACGGTAGAGCATTAATACGcagtgaggggagagggggagaagataaGGCGCGAGAATGAGGAGCGGTGCGCGCTAACGATCCGG

Function

NR:

description
ras-related protein Rab-38-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2376353 True 302 lncRNA 0.55 1 36106544 36106845

Neighbor

gene id symbol gene type direction distance location
LOC110507977 fzd4 coding upstream 94210 36005425 ~ 36012334 (+)
LOC110507976 LOC106581370 coding upstream 283660 35804534 ~ 35822884 (+)
LOC110507975 LOC106581363 coding upstream 587435 35465699 ~ 35519109 (+)
LOC110507973 LOC106581395 coding upstream 942085 35156006 ~ 35164459 (+)
gucy1a2 LOC106581392 coding upstream 995502 35014631 ~ 35111042 (+)
naalad2 LOC106581411 coding downstream 258810 36365655 ~ 36381011 (+)
LOC110508005 LOC106613226 coding downstream 331380 36438225 ~ 36440709 (+)
LOC110507218 LOC106591049 coding downstream 346916 36453761 ~ 36546497 (+)
LOC118944683 NA coding downstream 503890 36610735 ~ 36618726 (+)
LOC118936607 LOC106581404 coding downstream 571928 36678773 ~ 36703523 (+)
G2078423 rab38 non-coding upstream 5896 36100364 ~ 36100648 (+)
G2078420 NA non-coding upstream 28023 36078246 ~ 36078521 (+)
G2078419 NA non-coding upstream 28851 36077473 ~ 36077693 (+)
G2078416 NA non-coding upstream 31854 36074005 ~ 36074690 (+)
G2078351 NA non-coding upstream 108153 35998053 ~ 35998391 (+)
G2078427 NA non-coding downstream 321 36107166 ~ 36107986 (+)
G2078428 NA non-coding downstream 1213 36108058 ~ 36108619 (+)
G2078429 NA non-coding downstream 1911 36108756 ~ 36109124 (+)
G2078432 NA non-coding downstream 5734 36112579 ~ 36113120 (+)
G2078433 NA non-coding downstream 6484 36113329 ~ 36113618 (+)
G2078425 NA other upstream 2443 36102874 ~ 36104101 (+)
G2078382 NA other upstream 72545 36033285 ~ 36033999 (+)
G2078296 NA other upstream 174035 35932115 ~ 35932509 (+)
G2078253 NA other upstream 234811 35870485 ~ 35871733 (+)
G2078188 NA other upstream 308554 35797572 ~ 35797990 (+)
G2078493 NA other downstream 194093 36263506 ~ 36302664 (+)
LOC110536894 NA other downstream 1166641 37031161 ~ 37276857 (+)
G2079197 NA other downstream 1172260 37279105 ~ 37280832 (+)
G2079468 LOC106581367 other downstream 1259894 37366739 ~ 37368136 (+)

Expression


Co-expression Network