LOC120573847


Basic Information

Item Value
gene id LOC120573847
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 36822622 ~ 36826623 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU218180
GATGACTAGAGATTCTCTGATGAAGATCCCGAGGAATGACCTGGTGGAGAGTTTATCTGCTCAATAAGGGTCATCTGTGGCGATGCCCCGCCTCCTTCACGCTcatggggaggagggaggagaggaaggagaggaaggggagggaggagagagagggaacacAGACTTTTTGTAAACGGCTCGGAGGTCCAACCATCTTTCTCCGTCTGTCCTTTACACTATATCTGAACAACCTCTGTGAACTTTCATTATGAATAAATTTCAAAAACGT
>XR_005641786.1
ggcGGGGGGGATGACTAGAGATTCTCTGATGAAGATCCCGAGGAATGACCTGGTGGAGAGTTTATCTGCTCAATAAGGGTCATCTGTGGCGATGCCCCGCCTCCTTCACGCTcatggggaggagggaggagaggaaggagaggaaggggagggaggagagagagggaacacAGACTTTTTGTAAACGGCTCGGAGGTCCAACCATCTTTCTCCGTCTGTCCTTTACACTATATCTGAACAACCTCTGTGAACTTTCATTATGAATAAATTTCAAAAACGTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU218180 False 271 lncRNA 0.48 2 36822631 36826622
XR_005641786.1 True 281 lncRNA 0.50 2 36822622 36826623

Neighbor

gene id symbol gene type direction distance location
LOC120575385 NA coding upstream 64507 36754369 ~ 36758115 (+)
LOC120574787 NA coding upstream 368293 36436361 ~ 36454329 (+)
LOC120574797 NA coding upstream 421430 36388622 ~ 36401192 (+)
LOC120574805 pnmt coding upstream 457928 36357080 ~ 36364694 (+)
LOC120574800 NA coding upstream 482427 36332412 ~ 36340195 (+)
LOC120573814 NA coding downstream 119619 36946242 ~ 36949521 (+)
LOC120574686 wipf2,wipf2b,LOC102794289,LOC107752530,LOC107549849 coding downstream 212234 37038857 ~ 37057327 (+)
LOC120573828 NA coding downstream 293835 37120458 ~ 37137811 (+)
zgc:158376 LOC103361495,LOC101474986,LOC102781812,LOC102300501 coding downstream 320222 37146845 ~ 37167776 (+)
kpnb1 kpnb1 coding downstream 350452 37177075 ~ 37193351 (+)
G161173 NA non-coding upstream 69 36813266 ~ 36822553 (+)
G161172 NA non-coding upstream 15751 36806539 ~ 36806871 (+)
G161124 NA non-coding upstream 176881 36639163 ~ 36645741 (+)
G161116 NA non-coding upstream 198452 36623705 ~ 36624170 (+)
LOC120574819 NA non-coding upstream 278685 36543340 ~ 36543937 (+)
LOC120573899 NA non-coding downstream 41031 36867654 ~ 36868393 (+)
G161190 NA non-coding downstream 62154 36888777 ~ 36900317 (+)
G161226 NA non-coding downstream 109558 36936181 ~ 36938404 (+)
LOC120573813 NA non-coding downstream 118586 36945209 ~ 36946232 (+)
LOC120573858 NA non-coding downstream 159660 36986283 ~ 36990682 (+)
LOC120574801 NA other upstream 347150 36469606 ~ 36475472 (+)
G160851 LOC102784589,LOC104964221,LOC102077593,LOC101468505,LOC102290184,LOC102208295 other upstream 697070 36089620 ~ 36125552 (+)
LOC120575321 keratin,LOC103393440,LOC106904882 other upstream 1173638 35626515 ~ 35648984 (+)
LOC120575316 NA other upstream 1766966 35045717 ~ 35055656 (+)
G160423 mvp other upstream 1855673 34962100 ~ 34966949 (+)
utp18 utp18,LOC102793997,LOC101163956 other downstream 276750 37103373 ~ 37119254 (+)
LOC120575390 NA other downstream 1107439 37934062 ~ 37956436 (+)
G161714 NA other downstream 1644091 38470714 ~ 38471325 (+)
G161792 cdc27 other downstream 1944084 38770707 ~ 38772216 (+)
LOC120573912 cdc27 other downstream 1955994 38782617 ~ 38784044 (+)

Expression


Co-expression Network