Gene
RNA
| Item | Value |
|---|---|
| gene id | G295708 |
| gene name | NA |
| gene type | non-coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047613.1 |
| NCBI id | CM018559.1 |
| chromosome length | 22090854 |
| location | 14397147 ~ 14397385 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU350223 | True | 239 | lncRNA | 0.47 | 1 | 14397147 | 14397385 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| lgals8a | LOC108258055 | coding | downstream | 41595 | 14345091 ~ 14355552 (-) |
| tmem242 | tmem242,LOC107679673,LOC107555301 | coding | downstream | 86882 | 14305201 ~ 14310265 (-) |
| trnaa-agc_14 | NA | coding | downstream | 271161 | 14125914 ~ 14125986 (-) |
| cebpz | cebpz,LOC104960473 | coding | downstream | 365041 | 14020127 ~ 14032106 (-) |
| LOC113532178 | LOC108257557 | coding | downstream | 389765 | 14004144 ~ 14007382 (-) |
| bcl11bb | LOC108258024,LOC108426327,LOC103027528 | coding | upstream | 159719 | 14557104 ~ 14588256 (-) |
| clu | clu | coding | upstream | 224472 | 14621857 ~ 14632266 (-) |
| LOC113532135 | NA | coding | upstream | 284797 | 14682182 ~ 14686085 (-) |
| ccdc25 | ccdc25,LOC107675065 | coding | upstream | 292779 | 14690164 ~ 14696661 (-) |
| pbk | pbk,LOC107598104,LOC107717112,LOC107727585,LOC107676230,LOC107602197 | coding | upstream | 310675 | 14708060 ~ 14713903 (-) |
| trnas-gcu_18 | NA | non-coding | downstream | 146 | 14396920 ~ 14397001 (-) |
| trnas-gcu_17 | NA | non-coding | downstream | 959 | 14396107 ~ 14396188 (-) |
| LOC113532335 | NA | non-coding | downstream | 2383 | 14391568 ~ 14394764 (-) |
| G295631 | NA | non-coding | downstream | 156611 | 14240396 ~ 14240536 (-) |
| G295491 | NA | non-coding | downstream | 287183 | 14109481 ~ 14109964 (-) |
| G295753 | NA | non-coding | upstream | 120889 | 14518274 ~ 14518492 (-) |
| G295783 | NA | non-coding | upstream | 197031 | 14594416 ~ 14596412 (-) |
| G295827 | NA | non-coding | upstream | 272123 | 14669508 ~ 14669725 (-) |
| G295828 | NA | non-coding | upstream | 272716 | 14670101 ~ 14670310 (-) |
| G295836 | NA | non-coding | upstream | 290973 | 14688358 ~ 14688636 (-) |
| trnas-gcu_15 | NA | other | downstream | 10451 | 14386615 ~ 14386696 (-) |
| trnas-gcu_12 | NA | other | downstream | 13332 | 14383581 ~ 14383815 (-) |
| trnas-gcu_10 | NA | other | downstream | 14799 | 14382087 ~ 14382348 (-) |
| LOC113531878 | prkd3,LOC101070414 | other | downstream | 292502 | 14047198 ~ 14104645 (-) |
| tmem151ba | tmem151b | other | downstream | 1828310 | 12559990 ~ 12568837 (-) |
| trnal-cag_12 | NA | other | upstream | 194750 | 14592135 ~ 14592475 (-) |
| trnal-cag_13 | NA | other | upstream | 196526 | 14593911 ~ 14593993 (-) |
| trnal-cag_14 | NA | other | upstream | 197164 | 14594549 ~ 14594631 (-) |
| trnal-cag_15 | NA | other | upstream | 198928 | 14596313 ~ 14596395 (-) |
| pex7 | pex7,LOC107727680,LOC107676274 | other | upstream | 329016 | 14726401 ~ 14772035 (-) |
