G295828


Basic Information

Item Value
gene id G295828
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047613.1
NCBI id CM018559.1
chromosome length 22090854
location 14670101 ~ 14670310 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU350365
AAAAAAGTATGATCAAGCTTACAACCGGTTAGAGCGGAGTTAGTACGAGTTATTACATTAGCAAATACAGTACGATTTTAGGTTTGTATTTTTAGTTAGCgcttatttaaatgtttagtaAAGACGTAGATCTCCAGTCTTTGTTTGAAAGCAGTCAGTGACTCAATAAACAGCCAGGAGAAGTttattccaccacctgggtgccaggac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU350365 True 210 lncRNA 0.38 1 14670101 14670310

Neighbor

gene id symbol gene type direction distance location
clu clu coding downstream 37835 14621857 ~ 14632266 (-)
bcl11bb LOC108258024,LOC108426327,LOC103027528 coding downstream 81845 14557104 ~ 14588256 (-)
lgals8a LOC108258055 coding downstream 314549 14345091 ~ 14355552 (-)
tmem242 tmem242,LOC107679673,LOC107555301 coding downstream 359836 14305201 ~ 14310265 (-)
trnaa-agc_14 NA coding downstream 544115 14125914 ~ 14125986 (-)
LOC113532135 NA coding upstream 11872 14682182 ~ 14686085 (-)
ccdc25 ccdc25,LOC107675065 coding upstream 19854 14690164 ~ 14696661 (-)
pbk pbk,LOC107598104,LOC107717112,LOC107727585,LOC107676230,LOC107602197 coding upstream 37750 14708060 ~ 14713903 (-)
LOC113532199 slc35d3 coding upstream 47529 14717839 ~ 14725117 (-)
hey2 hey2,LOC107717129,LOC107727582,LOC106571366 coding upstream 106767 14777077 ~ 14785071 (-)
G295827 NA non-coding downstream 376 14669508 ~ 14669725 (-)
G295783 NA non-coding downstream 73689 14594416 ~ 14596412 (-)
G295753 NA non-coding downstream 151609 14518274 ~ 14518492 (-)
G295708 NA non-coding downstream 272716 14397147 ~ 14397385 (-)
trnas-gcu_18 NA non-coding downstream 273100 14396920 ~ 14397001 (-)
G295836 NA non-coding upstream 18048 14688358 ~ 14688636 (-)
G295909 NA non-coding upstream 122230 14792540 ~ 14792749 (-)
G296237 NA non-coding upstream 652681 15322991 ~ 15323410 (-)
G296731 NA non-coding upstream 1482024 16152334 ~ 16155973 (-)
G296734 NA non-coding upstream 1487024 16157334 ~ 16165845 (-)
trnal-cag_15 NA other downstream 73706 14596313 ~ 14596395 (-)
trnal-cag_14 NA other downstream 75470 14594549 ~ 14594631 (-)
trnal-cag_13 NA other downstream 76108 14593911 ~ 14593993 (-)
trnal-cag_12 NA other downstream 77626 14592135 ~ 14592475 (-)
trnas-gcu_15 NA other downstream 283405 14386615 ~ 14386696 (-)
pex7 pex7,LOC107727680,LOC107676274 other upstream 56091 14726401 ~ 14772035 (-)
pkib pkib other upstream 603544 15273854 ~ 15304297 (-)
G296263 cx32,LOC108257940,LOC108424424 other upstream 792771 15463081 ~ 15482361 (-)
pln NA other upstream 1463824 16134134 ~ 16142616 (-)
G296802 igf2r other upstream 1884793 16555103 ~ 16557927 (-)

Expression


Co-expression Network