Gene
RNA
| Item | Value |
|---|---|
| gene id | G298237 |
| gene name | NA |
| gene type | non-coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047613.1 |
| NCBI id | CM018559.1 |
| chromosome length | 22090854 |
| location | 19226317 ~ 19226706 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU353134 | True | 347 | lncRNA | 0.39 | 2 | 19226317 | 19226706 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| si:dkeyp-55f12.3 | NA | coding | upstream | 139113 | 19085708 ~ 19087204 (+) |
| btbd7 | LOC108257833 | coding | upstream | 161874 | 19038213 ~ 19064443 (+) |
| prima1 | LOC108257636 | coding | upstream | 237661 | 18953582 ~ 18988656 (+) |
| asb2a.1 | asb2 | coding | upstream | 289031 | 18917462 ~ 18937286 (+) |
| asb2a.2 | NA | coding | upstream | 311653 | 18906552 ~ 18914664 (+) |
| LOC113547660 | NA | coding | downstream | 14841 | 19241547 ~ 19249331 (+) |
| LOC113547657 | LOC108257673 | coding | downstream | 27330 | 19254036 ~ 19264088 (+) |
| LOC117599671 | NA | coding | downstream | 102519 | 19329225 ~ 19329925 (+) |
| LOC113524710 | NA | coding | downstream | 139300 | 19366006 ~ 19366943 (+) |
| LOC117599700 | NA | coding | downstream | 141626 | 19368332 ~ 19466148 (+) |
| G298231 | NA | non-coding | upstream | 6182 | 19219009 ~ 19220135 (+) |
| G298230 | NA | non-coding | upstream | 9116 | 19216559 ~ 19217201 (+) |
| G298215 | NA | non-coding | upstream | 34764 | 19188901 ~ 19191553 (+) |
| G298195 | NA | non-coding | upstream | 83336 | 19140739 ~ 19142981 (+) |
| G298187 | NA | non-coding | upstream | 115503 | 19110587 ~ 19110814 (+) |
| G298374 | NA | non-coding | downstream | 51165 | 19277871 ~ 19283479 (+) |
| G298377 | NA | non-coding | downstream | 60952 | 19287658 ~ 19287896 (+) |
| G298378 | NA | non-coding | downstream | 62760 | 19289466 ~ 19289738 (+) |
| G298381 | NA | non-coding | downstream | 68657 | 19295363 ~ 19295608 (+) |
| G298397 | NA | non-coding | downstream | 98478 | 19325184 ~ 19325434 (+) |
| itpk1a | itpk1,LOC108257830 | other | upstream | 88704 | 19095952 ~ 19137613 (+) |
| syndig1l | syndig1l,LOC107562693,LOC107659181,LOC107602907,LOC107711667 | other | upstream | 698118 | 18495675 ~ 18528199 (+) |
| ino80 | ino80,LOC107668207,LOC107739367,LOC107721325 | other | upstream | 980260 | 18186027 ~ 18246057 (+) |
| sipa1l1 | sipa1l1,LOC107721317,LOC107756605,LOC107659170 | other | upstream | 1284139 | 17854724 ~ 17942178 (+) |
| max | max,LOC107721316 | other | upstream | 1419140 | 17789100 ~ 17807177 (+) |
| G298379 | NA | other | downstream | 63279 | 19289985 ~ 19290539 (+) |
| G298409 | NA | other | downstream | 174843 | 19401549 ~ 19546734 (+) |
| LOC117599696 | NA | other | downstream | 855800 | 20082506 ~ 20084497 (+) |
| flrt2 | flrt2,LOC108258011 | other | downstream | 1598983 | 20825689 ~ 20838690 (+) |
| G299088 | zgc:86709,ACTC1,actc1,LOC108414322 | other | downstream | 2106559 | 21333265 ~ 21336047 (+) |
