Gene
RNA
| Item | Value |
|---|---|
| gene id | G385595 |
| gene name | NA |
| gene type | non-coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047621.1 |
| NCBI id | CM018567.1 |
| chromosome length | 18889892 |
| location | 12547806 ~ 12548129 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU457133 | True | 324 | lncRNA | 0.45 | 1 | 12547806 | 12548129 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| lamc3 | lamc3,LOC107570860 | coding | downstream | 81824 | 12344518 ~ 12465982 (-) |
| aif1l | aif1l,LOC107570864 | coding | downstream | 206210 | 12320637 ~ 12341596 (-) |
| gfm2 | gfm2 | coding | downstream | 238186 | 12285856 ~ 12309620 (-) |
| enc1 | enc1,LOC107655934,LOC107757521,LOC107570861 | coding | downstream | 300241 | 12236141 ~ 12247565 (-) |
| LOC113531392 | LOC108259787,LOC108259744,LOC108280851,LOC108427436,LOC108260584,LOC108260664,LOC108260580,LOC108427435,LOC108260581 | coding | downstream | 327772 | 12219094 ~ 12220034 (-) |
| si:dkey-34e4.1 | NA | coding | upstream | 386005 | 12934134 ~ 12990090 (-) |
| dab2ipb | dab2ip,LOC108259889 | coding | upstream | 475488 | 13023617 ~ 13156723 (-) |
| si:dkeyp-72a4.1 | NA | coding | upstream | 614343 | 13162472 ~ 13179627 (-) |
| zswim7 | zswim7,LOC107712139,LOC107688637,LOC107665024,LOC107740465 | coding | upstream | 738723 | 13286852 ~ 13320343 (-) |
| nanos2 | NA | coding | upstream | 773116 | 13321245 ~ 13322461 (-) |
| G385590 | NA | non-coding | downstream | 77632 | 12469940 ~ 12470174 (-) |
| G385589 | NA | non-coding | downstream | 77924 | 12469229 ~ 12469882 (-) |
| G385574 | NA | non-coding | downstream | 205175 | 12342422 ~ 12342631 (-) |
| G385292 | btf3,LOC107655933 | non-coding | downstream | 537583 | 11984134 ~ 12010223 (-) |
| G385272 | NA | non-coding | downstream | 649416 | 11895557 ~ 11898390 (-) |
| G385692 | NA | non-coding | upstream | 169080 | 12717209 ~ 12718589 (-) |
| G385758 | NA | non-coding | upstream | 278657 | 12826786 ~ 12827523 (-) |
| G386630 | NA | non-coding | upstream | 645860 | 13193989 ~ 13194202 (-) |
| G386632 | NA | non-coding | upstream | 646659 | 13194788 ~ 13194993 (-) |
| G386644 | NA | non-coding | upstream | 659270 | 13207399 ~ 13208074 (-) |
| LOC113531030 | NA | other | downstream | 849262 | 11691234 ~ 11698544 (-) |
| map1b | map1b,LOC107597920 | other | downstream | 920120 | 11546309 ~ 11627686 (-) |
| G384960 | NA | other | downstream | 1463865 | 11078712 ~ 11083941 (-) |
| G384811 | NA | other | downstream | 1941534 | 10605990 ~ 10606272 (-) |
| LOC113531664 | NA | other | downstream | 3292361 | 9240716 ~ 9255445 (-) |
| garnl3 | garnl3,LOC107700942 | other | upstream | 259072 | 12807201 ~ 12891295 (-) |
| selenow1 | LOC103044489 | other | upstream | 1067993 | 13616122 ~ 13680525 (-) |
| ccdc84 | ccdc84 | other | upstream | 2368533 | 14916662 ~ 14923390 (-) |
| nrgna | NA | other | upstream | 2470764 | 15018893 ~ 15026869 (-) |
| gltpd2 | LOC108260402 | other | upstream | 3334209 | 15882338 ~ 15888059 (-) |
