nrgna


Basic Information

Item Value
gene id nrgna
gene name NA
gene type misc
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047621.1
NCBI id CM018567.1
chromosome length 18889892
location 15018893 ~ 15026869 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU459094
GCCGCGCAAACAGGAGGCTTCAGCAAGACACTCTTACCTGAGTGCAACTTTATCATTAACGCtcataaatatcacaaaaaaactCTCTTTTCTTCGCCATGGACTGTCGAAAAGAGGTCTGCGGTCAGCCACAAGATGAGGACATCATGGATATTCCACTAGACGACCCTACCGCTAACAAGGCTGCCACTAAGATCCAGGCCGGCTTCCGGGGTCACATGACTAGGAAGAAGATGAAGGATGACAAACCAAGAGAAGAGAAACAAAGGGATAAGAAGTAGCGTGAGAGGACATCCACTGCCGCCCTGACACTTTTCCACACATCACCGCAATAACCAGAGGTCGAAGAGAAACTTTCggtgtataatatatacaagTGTAAACTTAGAAACTAAGCCTGGATCAGTGACCTTTCACTCCTCCTCTGCTTCTAATAGAGTTTGGACAGTAGTCTGTGGTGCACGATAGCCCCTCAGCATGTTACATAGCTTCAGTGATTAACATTTTGGTAAAGGTACTCTGTTGCTTCTAATAAGACAAGCAAAAATgtgaactgatttttttttttctttttttcttttttt
>XM_026922391.2
GACGCTATAGATCAGAGAGGAAGCCGCGCAAACAGGAGGCTTCAGCAAGACACTCTTACCTGAGTGCAACTTTATCATTAACGCtcataaatatcacaaaaaaactCTCTTTTCTTCGCCATGGACTGTCGAAAAGAGGTCTGCGGTCAGCCACAAGATGAGGACATCATGGATATTCCACTAGACGACCCTACCGCTAACAAGGCTGCCACTAAGATCCAGGCCGGCTTCCGGGGTCACATGACTAGGAAGAAGATGAAGGATGACAAACCAAGAGAAGAGAAACAAAGGGATAAGAAGTAGCGTGAGAGGACATCCACTGCCGCCCTGACACTTTTCCACACATCACCGCAATAACCAGAGGTCGAAGAGAAACTTTCggtgtataatatatacaagTGTAAACTTAGAAACTAAGCCTGGATCAGTGACCTTTCACTCCTCCTCTGCTTCTAATAGAGTTTGGACAGTAGTCTGTGGTGCACGATAGCCCCTCAGCATGTTACATAGCTTCAGTGATTAACATTTTGGTAAAGGTACTCTGTTGCTTCTAATAAGACAAGCAAAAATgtgaactgatttttttttttctttttttcttttttttttggtgctccCCCCTCCTCCTGCCTGTATTCTTACAGTAtagaagtatgcatttattaCATTGCCTTTTCTAGTGTGGCTTTGTTTCTGCCTgtttaataaagcaaaaaatgatTCGGATTCA

Function

NR:

description
neurogranin-like

GO:

id name namespace
GO:0005102 signaling receptor binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU459094 False 584 lncRNA 0.43 3 15019017 15026847
XM_026922391.2 True 730 mRNA 0.42 3 15018893 15026869

Neighbor

gene id symbol gene type direction distance location
LOC113531526 hepacam,LOC108260456 coding downstream 7540 15002425 ~ 15011353 (-)
ccdc15 ccdc15 coding downstream 17463 14992398 ~ 15001430 (-)
slc37a2 slc37a2,LOC107691751 coding downstream 28115 14978672 ~ 14990778 (-)
LOC113531520 LOC108259736,LOC108427349,LOC107664292,LOC107556423,LOC107600796,LOC107712935 coding downstream 42231 14966582 ~ 14976662 (-)
oafb LOC108260356 coding downstream 59340 14952423 ~ 14959553 (-)
btg4 btg4,LOC107745130,LOC107556417 coding upstream 189214 15216083 ~ 15218113 (-)
ppp2r1ba ppp2r1b,LOC108260120,LOC108428700,LOC103032850 coding upstream 239231 15266100 ~ 15278746 (-)
alg9 alg9,LOC107691744 coding upstream 256079 15282948 ~ 15291411 (-)
fdxacb1 fdxacb1 coding upstream 272606 15299475 ~ 15305874 (-)
ufc1 ufc1,LOC107574697,LOC107691797,LOC107603203 coding upstream 284216 15311085 ~ 15313820 (-)
G387277 NA non-coding downstream 141435 14870519 ~ 14877458 (-)
G387048 NA non-coding downstream 678697 14339316 ~ 14340196 (-)
G386873 NA non-coding downstream 1088195 13930487 ~ 13930698 (-)
G386868 NA non-coding downstream 1102092 13911262 ~ 13916801 (-)
G387434 NA non-coding upstream 171737 15198606 ~ 15204665 (-)
LOC117596201 NA non-coding upstream 193911 15220780 ~ 15234734 (-)
G387465 NA non-coding upstream 254979 15281848 ~ 15282052 (-)
G387467 NA non-coding upstream 255585 15282454 ~ 15282756 (-)
G387469 NA non-coding upstream 268578 15295447 ~ 15297906 (-)
ccdc84 ccdc84 other downstream 95503 14916662 ~ 14923390 (-)
selenow1 LOC103044489 other downstream 1338368 13616122 ~ 13680525 (-)
garnl3 garnl3,LOC107700942 other downstream 2127598 12807201 ~ 12891295 (-)
LOC113531030 NA other downstream 3320349 11691234 ~ 11698544 (-)
map1b map1b,LOC107597920 other downstream 3391207 11546309 ~ 11627686 (-)
gltpd2 LOC108260402 other upstream 855469 15882338 ~ 15888059 (-)
LOC113531235 NA other upstream 1336625 16363494 ~ 16380787 (-)
fxyd2 NA other upstream 1731371 16758240 ~ 16763476 (-)
crx crx other upstream 1939097 16965966 ~ 16970026 (-)
G388705 nono,LOC103047741,LOC107672625,LOC107741185,LOC107756548 other upstream 2263475 17290344 ~ 17328020 (-)

Expression


Co-expression Network