Gene
RNA
| Item | Value |
|---|---|
| gene id | G386630 |
| gene name | NA |
| gene type | non-coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047621.1 |
| NCBI id | CM018567.1 |
| chromosome length | 18889892 |
| location | 13193989 ~ 13194202 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU458280 | True | 214 | lncRNA | 0.36 | 1 | 13193989 | 13194202 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| si:dkeyp-72a4.1 | NA | coding | downstream | 14362 | 13162472 ~ 13179627 (-) |
| dab2ipb | dab2ip,LOC108259889 | coding | downstream | 37266 | 13023617 ~ 13156723 (-) |
| si:dkey-34e4.1 | NA | coding | downstream | 203899 | 12934134 ~ 12990090 (-) |
| lamc3 | lamc3,LOC107570860 | coding | downstream | 728007 | 12344518 ~ 12465982 (-) |
| aif1l | aif1l,LOC107570864 | coding | downstream | 852393 | 12320637 ~ 12341596 (-) |
| zswim7 | zswim7,LOC107712139,LOC107688637,LOC107665024,LOC107740465 | coding | upstream | 92650 | 13286852 ~ 13320343 (-) |
| nanos2 | NA | coding | upstream | 127043 | 13321245 ~ 13322461 (-) |
| abr | abr,si:ch211-253h3.1,LOC103375456,LOC107731041,LOC107688618,LOC107712163 | coding | upstream | 131580 | 13325782 ~ 13477225 (-) |
| aspa | aspa | coding | upstream | 290380 | 13484582 ~ 13503992 (-) |
| pho | NA | coding | upstream | 312310 | 13506512 ~ 13516580 (-) |
| G385758 | NA | non-coding | downstream | 366466 | 12826786 ~ 12827523 (-) |
| G385692 | NA | non-coding | downstream | 475400 | 12717209 ~ 12718589 (-) |
| G385595 | NA | non-coding | downstream | 645860 | 12547806 ~ 12548129 (-) |
| G385590 | NA | non-coding | downstream | 723815 | 12469940 ~ 12470174 (-) |
| G385589 | NA | non-coding | downstream | 724107 | 12469229 ~ 12469882 (-) |
| G386632 | NA | non-coding | upstream | 586 | 13194788 ~ 13194993 (-) |
| G386644 | NA | non-coding | upstream | 13197 | 13207399 ~ 13208074 (-) |
| G386705 | NA | non-coding | upstream | 99321 | 13293523 ~ 13322992 (-) |
| G386730 | NA | non-coding | upstream | 133123 | 13327325 ~ 13349203 (-) |
| G386763 | NA | non-coding | upstream | 328884 | 13523086 ~ 13523322 (-) |
| garnl3 | garnl3,LOC107700942 | other | downstream | 302694 | 12807201 ~ 12891295 (-) |
| LOC113531030 | NA | other | downstream | 1495445 | 11691234 ~ 11698544 (-) |
| map1b | map1b,LOC107597920 | other | downstream | 1566303 | 11546309 ~ 11627686 (-) |
| G384960 | NA | other | downstream | 2110048 | 11078712 ~ 11083941 (-) |
| G384811 | NA | other | downstream | 2587717 | 10605990 ~ 10606272 (-) |
| selenow1 | LOC103044489 | other | upstream | 421920 | 13616122 ~ 13680525 (-) |
| ccdc84 | ccdc84 | other | upstream | 1722460 | 14916662 ~ 14923390 (-) |
| nrgna | NA | other | upstream | 1824691 | 15018893 ~ 15026869 (-) |
| gltpd2 | LOC108260402 | other | upstream | 2688136 | 15882338 ~ 15888059 (-) |
| LOC113531235 | NA | other | upstream | 3169292 | 16363494 ~ 16380787 (-) |
