si:dkey-34e4.1


Basic Information

Item Value
gene id si:dkey-34e4.1
gene name NA
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047621.1
NCBI id CM018567.1
chromosome length 18889892
location 12934134 ~ 12990090 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026922512.2
ACCTGCCCCAGTAGGAGGAAGCTCTTGGGAATTTTTAGCTTTGAAGTGCGGTAACCGTTAATACATGAAATGTAAGTGTATTTACAGTCAGACGTCTGTAGTAAACATTAACAAGTACGAAACGGTCGGTGAAACGCTCAGAAGTGGGACAAGCgaagggaaaaaataataatatcattgtattgttttgttttggatcCTCCCCCTTCCTCTGTTTGTCCTCGTGCCCTGTTTCTGGATTCACGCGCTGACAGGCTCCACAATGCGTCCTGCGCTCGCGCCTCGTCTTGGGCGGCTGTGTAAACGCTGGGGCATTTTTTGAGGAAACAGACATGTGTGCTGTGTCCCGAACCATCCCAGATTTTTGAGTGGAATTTCCCTGGACGgtgtggactgtgtgtgtgtgtgtggggggggatTTTGAGGGGAAAATGCCCGGCAGGAACAGGTACAACCTGGTGGACGACGCGGCGGATTCGCGCGTGCCGCTTCACAACGACGAGGCGTTTCAGCACGGCATTCATTTCCAAGCCAAGTATATTGGTAGTCTGGATGTCCCGAGACCCAACAGTCGCATGGAGATCGTCGCTGCCATGCGGAGAATCAGATACGAGTTCAAGGCGAAGAGcattaagaagaagaaagtgaaCATGGTGGTCTCGGTGGACGGCGTAAAAGTGATGCTTCGCAAGAAACAGAAGAGGAAAGAGTGGACGTGGGATGAAAGTAAAATGCTGGTGATGCACGACCCAGTGTACAGGATTTTCTATGTGTCCCATGACTCTCAGGATTTAAAGATTTTTAGCTACATTGCCAGAGATGGGTCCAGCAACACCTTCAGGTGCAATGTCTTCAAGTCCAAAAAGAAGAGTCAGGCAATGCGTATAGTGAGGACAGTAGGCCAGGCCTTCGAGGTGTGCCATAAGCTGAGTCTGCAAACTGCAgaaggacagatggacagacagatggacagacttGCACTTGGAGAGAGTGGAAAATCTGAGGAGGAGACAACTAGAGAAGGCCATGAGTTGACTGGAGCTGAGCGCGTCAGTGGCGTAGAAATGGAGATGAAGTCGCTGCCAGCCAGTGAACAAGCCATTAATGATGTCCTTCAGAGCCTATCAGAGCTGAACATGGTGAACCCAGGACAAACTCTCCAGGAACTAGAGGAGATGCCTCTTCACCCTCTGTCTCCCAGCAGccctcagtctctgtctctcacaccaCTGGCTGACCAGCACCACCTGCATTTATTACAGCAGCAGGTACTCCAGCAGCAACAGCAAGCTCAAGTCGCTGTGGCGCAGGTGCAGCTGCTGAAGGACCAGATAGCAGCCGAGACGGCTGCCAGGATGGAGGCTCAGGCCAGGAGCCACCAGCTCCTGCTGCAGAACCGAGACCTGCTGCAGCACATAGCGCTGCTGGTCCAACATGTCAGTGAGCTGGAGGCCAAAGTCAACGGCCATGCAAATAATGAAGACTGGAGAAGCTCGTcatcctgttctctctctctcaacctgAAAAACCACTATAGTTCAGACCAGCCCATCACGTCCACCCCAGCAGGAGAGGTCCAGGTTTCCCCCACACCCCCTTATACCATGGCCTGTGCTGAGTCCTACCTCAGCCTGCTCAGAACGGGAATGGCCCATACCGTCACCACCAATGGCAAGCCAGCAAACGTAGGACACAAGCAGAGAATGGGCAGTACAAGCAGTGACTTCACAAAGTTCAATTCAGCGGCAGTGGATCAACGGGTTAAAGAAATAATCCCAAAACTGGACCCGCCCCCTCCTCCCGTCAACCGAAAGCGACCGAACAGAACAGGATCAGAAACAGCATCGAGTCTGGCCTTCAGCTCGTCCTTCCCTGACATTACACCATGTTTTGTTTCTCCGGGTGAGTTCGGCAATGATCTCAGCGCCTCCTGTTCGGCGAGCGAAGATTCCGGTATGCGGTCCGACAACAAGCCACCTGGAGAGGATCTGTTCGAAGACCGCAACTCCGCCGTCCTCTCCACGTCCAGCACCTGCAGCAGTTTGCCAGAGGACCACCCCCTGGCTGGAACCCCGCCCCGCTCGGCCACCCCCAACAGCTACGAGCACACGCTTCCTTTTTCATCTCCCCTTAACAAAACCTGCCTTCACATCAGTCTGAGTGAGGACGAGCTTCTGGAGGACGGGGTCTTTACCACAGCAAGCCCACTAAGTAGCTCACTTAGTTAGTAGTAAAGGCAACAAAAACTTGAAACTAGCGAGGGTTCATGACTGGACGGAATATAGCTACTTAAGCCATGCTTTCTCCTTCTACAGCagctaaagaaaacaaaaattgaTATTCTGGTGGAAACATGGCTGCTGTGATTGACCCTGTACTTTAATGGCAAAGTCAATTTGCCATTGTTACTTTCTTCCCTGGGTGGCATAGTGGTGCTGCAGGAACATGTtggctccagggtccccagttcgatcctgacttcaggttactgcctgtgtggagtttctcatggtCTCCCCAtttccatgtgggtttcctctgggttctccagtttcctcctaagGTGTCTTGGCAACTCTTAACTTGCTCCTTGGTTTGAATgagtgtacatggtgccctgtaatggactggcatccccaTCATGCATGGCACCCAATGATCCTGGAATAGGTTCCAGATTCTCCACAACCCTGATGATAAAGcggttacagaagatgaatgaatgaatgaattttcttCCCTGCCTTTATTAAGGACTTTTATTAATGCGGGTGTCTTCTTCTAAGACAAAAGCACTCACTGGGTCGTAATCAGAGTTGAATTAAGCTTGTGTCGTGAAGATTTAATTTGCACGTTTGCAGATTTAATTTGAAgactgaaattgtgcacatcatTATTCAGGTGTAACTAGCAGTTACGTCGCAAGTTATGCATGCCAGGtggaatttaattaaaacaggATTTTTGACAGCAAAGCAAGAAAAAGCAAATGCAATATCATTCTTTCTGGTATTTTGACTCAAGAAAAATCTCTACATTAAAGTGATTCGCTTAATTTGAATGGGAAGCCCAGAAAATCGACTTCTAACTCATCGACTGCGTAGCTCATGTCTGAATACGAGTAACTTTCctcataaatattaacataaatatttacaacTTTTGGACTTACGTGAttaactctgaatacggcccatTATGTGCAATATCTTTAAACGTTTTTCACGTGAAAATGTACTGGAAATTAATGCACACTGGACTGAGGTGTGTaaatagaaatttttttttttttagaaaaatgatTAGGTTGAATTAGAACCTAGAAAAGAAAAGGGTATAGAAATGTATTAGAAAAtaagactgtttttttaattagctgCTACATTTTATTGTAAGAATTTATACATCTCAAGTCGATGGACTattgttgaaattaaatattgatgAAACGCTTTGAAGGTTGAAGAGCAGACAGGAGAAGAAGCATCACCAgggaaattatatttatttaaaaaaaaaaaagcaaacattttgGTGACAGAGAATGGTCTAGGTCAAGTCTGGAAAGAAATGCAAATGCTCATCAAAAATGTGTGCAGAAATATGCAAACGACATGGACGAGGGAGTTTAATCTAGATATCATAATCGGAGCAAATCACTGCTCATTTAGTTTGGTTTAAGGAATGGAAAGATTGACACCCAGATGAAGCAAAGCATAATTAAACTTTTGAATCATGTTTGCAACACTGCCATGGTGTCATCATCAGCTGGAAAGCAGGACAAGATTCTTATCGCTCCGTTCTTCCTGATGGAGAATAGTGCagtgatagacagacagacagatagacagaatcCCGGGGTGGAAAAAAAGTGTTGCCTTAGCAGTGAATTGACTCCGAGGTGAAGCGAGACCAAGGTAAATCAATTTCCTTGCTCTGTGGATTTCCTTGTATTATTGATACAGATAACATCATGGTGAGCTCAAAAAAAGTTCCGACTTTTCCAGCCCTGTAGAAGTGGGGACACTGTGGTAGGTTTAAAATTAACCAAACTAACAGACATTTTGAGACACAAAACTGTGAAATGTGCATGAAGACATCTAGCAATAAGATGCGCATCAAGAACAATGTTAGCTTTGTGTACTAGGGACAGAAGGAACAAAAAAGATgtcaggagagaaagaaaagtgagaATGAATGAGATGGAAGGGATTAGTAGAGAGGAAGATACCACCGCAAGAAGGAAGAAGGTGGAAAAGACATGGAGGTAGGGAGTGCATTTGCAGTGTCACTGTGGAAACAGGTACAGTTACACTCACagcaataaaactgaaataatgaaaagaataaataaacaaaacacatgtTAAACCA
>XM_034300918.1
AACCTGCCCCAGTAGGAGGAAGCTCTTGGGAATTTTTAGCTTTGAAGTGCGGTAACCGTTAATACATGAAATTATATTGGTAGTCTGGATGTCCCGAGACCCAACAGTCGCATGGAGATCGTCGCTGCCATGCGGAGAATCAGATACGAGTTCAAGGCGAAGAGcattaagaagaagaaagtgaaCATGGTGGTCTCGGTGGACGGCGTAAAAGTGATGCTTCGCAAGAAACAGAAGAGGAAAGAGTGGACGTGGGATGAAAGTAAAATGCTGGTGATGCACGACCCAGTGTACAGGATTTTCTATGTGTCCCATGACTCTCAGGATTTAAAGATTTTTAGCTACATTGCCAGAGATGGGTCCAGCAACACCTTCAGGTGCAATGTCTTCAAGTCCAAAAAGAAGAGTCAGGCAATGCGTATAGTGAGGACAGTAGGCCAGGCCTTCGAGGTGTGCCATAAGCTGAGTCTGCAAACTGCAgaaggacagatggacagacagatggacagacttGCACTTGGAGAGAGTGGAAAATCTGAGGAGGAGACAACTAGAGAAGGCCATGAGTTGACTGGAGCTGAGCGCGTCAGTGGCGTAGAAATGGAGATGAAGTCGCTGCCAGCCAGTGAACAAGCCATTAATGATGTCCTTCAGAGCCTATCAGAGCTGAACATGGTGAACCCAGGACAAACTCTCCAGGAACTAGAGGAGATGCCTCTTCACCCTCTGTCTCCCAGCAGccctcagtctctgtctctcacaccaCTGGCTGACCAGCACCACCTGCATTTATTACAGCAGCAGGTACTCCAGCAGCAACAGCAAGCTCAAGTCGCTGTGGCGCAGGTGCAGCTGCTGAAGGACCAGATAGCAGCCGAGACGGCTGCCAGGATGGAGGCTCAGGCCAGGAGCCACCAGCTCCTGCTGCAGAACCGAGACCTGCTGCAGCACATAGCGCTGCTGGTCCAACATGTCAGTGAGCTGGAGGCCAAAGTCAACGGCCATGCAAATAATGAAGACTGGAGAAGCTCGTcatcctgttctctctctctcaacctgAAAAACCACTATAGTTCAGACCAGCCCATCACGTCCACCCCAGCAGGAGAGGTCCAGGTTTCCCCCACACCCCCTTATACCATGGCCTGTGCTGAGTCCTACCTCAGCCTGCTCAGAACGGGAATGGCCCATACCGTCACCACCAATGGCAAGCCAGCAAACGTAGGACACAAGCAGAGAATGGGCAGTACAAGCAGTGACTTCACAAAGTTCAATTCAGCGGCAGTGGATCAACGGGTTAAAGAAATAATCCCAAAACTGGACCCGCCCCCTCCTCCCGTCAACCGAAAGCGACCGAACAGAACAGGATCAGAAACAGCATCGAGTCTGGCCTTCAGCTCGTCCTTCCCTGACATTACACCATGTTTTGTTTCTCCGGGTGAGTTCGGCAATGATCTCAGCGCCTCCTGTTCGGCGAGCGAAGATTCCGGTATGCGGTCCGACAACAAGCCACCTGGAGAGGATCTGTTCGAAGACCGCAACTCCGCCGTCCTCTCCACGTCCAGCACCTGCAGCAGTTTGCCAGAGGACCACCCCCTGGCTGGAACCCCGCCCCGCTCGGCCACCCCCAACAGCTACGAGCACACGCTTCCTTTTTCATCTCCCCTTAACAAAACCTGCCTTCACATCAGTCTGAGTGAGGACGAGCTTCTGGAGGACGGGGTCTTTACCACAGCAAGCCCACTAAGTAGCTCACTTAGTTAGTAGTAAAGGCAACAAAAACTTGAAACTAGCGAGGGTTCATGACTGGACGGAATATAGCTACTTAAGCCATGCTTTCTCCTTCTACAGCagctaaagaaaacaaaaattgaTATTCTGGTGGAAACATGGCTGCTGTGATTGACCCTGTACTTTAATGGCAAAGTCAATTTGCCATTGTTACTTTCTTCCCTGGGTGGCATAGTGGTGCTGCAGGAACATGTtggctccagggtccccagttcgatcctgacttcaggttactgcctgtgtggagtttctcatggtCTCCCCAtttccatgtgggtttcctctgggttctccagtttcctcctaagGTGTCTTGGCAACTCTTAACTTGCTCCTTGGTTTGAATgagtgtacatggtgccctgtaatggactggcatccccaTCATGCATGGCACCCAATGATCCTGGAATAGGTTCCAGATTCTCCACAACCCTGATGATAAAGcggttacagaagatgaatgaatgaatgaattttcttCCCTGCCTTTATTAAGGACTTTTATTAATGCGGGTGTCTTCTTCTAAGACAAAAGCACTCACTGGGTCGTAATCAGAGTTGAATTAAGCTTGTGTCGTGAAGATTTAATTTGCACGTTTGCAGATTTAATTTGAAgactgaaattgtgcacatcatTATTCAGGTGTAACTAGCAGTTACGTCGCAAGTTATGCATGCCAGGtggaatttaattaaaacaggATTTTTGACAGCAAAGCAAGAAAAAGCAAATGCAATATCATTCTTTCTGGTATTTTGACTCAAGAAAAATCTCTACATTAAAGTGATTCGCTTAATTTGAATGGGAAGCCCAGAAAATCGACTTCTAACTCATCGACTGCGTAGCTCATGTCTGAATACGAGTAACTTTCctcataaatattaacataaatatttacaacTTTTGGACTTACGTGAttaactctgaatacggcccatTATGTGCAATATCTTTAAACGTTTTTCACGTGAAAATGTACTGGAAATTAATGCACACTGGACTGAGGTGTGTaaatagaaatttttttttttttagaaaaatgatTAGGTTGAATTAGAACCTAGAAAAGAAAAGGGTATAGAAATGTATTAGAAAAtaagactgtttttttaattagctgCTACATTTTATTGTAAGAATTTATACATCTCAAGTCGATGGACTattgttgaaattaaatattgatgAAACGCTTTGAAGGTTGAAGAGCAGACAGGAGAAGAAGCATCACCAgggaaattatatttatttaaaaaaaaaaaagcaaacattttgGTGACAGAGAATGGTCTAGGTCAAGTCTGGAAAGAAATGCAAATGCTCATCAAAAATGTGTGCAGAAATATGCAAACGACATGGACGAGGGAGTTTAATCTAGATATCATAATCGGAGCAAATCACTGCTCATTTAGTTTGGTTTAAGGAATGGAAAGATTGACACCCAGATGAAGCAAAGCATAATTAAACTTTTGAATCATGTTTGCAACACTGCCATGGTGTCATCATCAGCTGGAAAGCAGGACAAGATTCTTATCGCTCCGTTCTTCCTGATGGAGAATAGTGCagtgatagacagacagacagatagacagaatcCCGGGGTGGAAAAAAAGTGTTGCCTTAGCAGTGAATTGACTCCGAGGTGAAGCGAGACCAAGGTAAATCAATTTCCTTGCTCTGTGGATTTCCTTGTATTATTGATACAGATAACATCATGGTGAGCTCAAAAAAAGTTCCGACTTTTCCAGCCCTGTAGAAGTGGGGACACTGTGGTAGGTTTAAAATTAACCAAACTAACAGACATTTTGAGACACAAAACTGTGAAATGTGCATGAAGACATCTAGCAATAAGATGCGCATCAAGAACAATGTTAGCTTTGTGTACTAGGGACAGAAGGAACAAAAAAGATgtcaggagagaaagaaaagtgagaATGAATGAGATGGAAGGGATTAGTAGAGAGGAAGATACCACCGCAAGAAGGAAGAAGGTGGAAAAGACATGGAGGTAGGGAGTGCATTTGCAGTGTCACTGTGGAAACAGGTACAGTTACACTCACagcaataaaactgaaataatgaaaagaataaataaacaaaacacatgtTAAACCA

Function

NR:

description
PREDICTED: carboxyl-terminal PDZ ligand of neuronal nitric oxide synthase protein isoform X1

GO: NA

KEGG:

id description
K16513 NOS1AP, CAPON; carboxyl-terminal PDZ ligand of neuronal nitric oxide synthase protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026922512.2 True 4374 mRNA 0.46 11 12934134 12990089
XM_034300918.1 False 3910 mRNA 0.45 11 12934134 12990090

Neighbor

gene id symbol gene type direction distance location
lamc3 lamc3,LOC107570860 coding downstream 468152 12344518 ~ 12465982 (-)
aif1l aif1l,LOC107570864 coding downstream 592538 12320637 ~ 12341596 (-)
gfm2 gfm2 coding downstream 624514 12285856 ~ 12309620 (-)
enc1 enc1,LOC107655934,LOC107757521,LOC107570861 coding downstream 686569 12236141 ~ 12247565 (-)
LOC113531392 LOC108259787,LOC108259744,LOC108280851,LOC108427436,LOC108260584,LOC108260664,LOC108260580,LOC108427435,LOC108260581 coding downstream 714100 12219094 ~ 12220034 (-)
dab2ipb dab2ip,LOC108259889 coding upstream 33527 13023617 ~ 13156723 (-)
si:dkeyp-72a4.1 NA coding upstream 172382 13162472 ~ 13179627 (-)
zswim7 zswim7,LOC107712139,LOC107688637,LOC107665024,LOC107740465 coding upstream 296762 13286852 ~ 13320343 (-)
nanos2 NA coding upstream 331155 13321245 ~ 13322461 (-)
abr abr,si:ch211-253h3.1,LOC103375456,LOC107731041,LOC107688618,LOC107712163 coding upstream 335692 13325782 ~ 13477225 (-)
G385758 NA non-coding downstream 106611 12826786 ~ 12827523 (-)
G385692 NA non-coding downstream 215545 12717209 ~ 12718589 (-)
G385595 NA non-coding downstream 386005 12547806 ~ 12548129 (-)
G385590 NA non-coding downstream 463960 12469940 ~ 12470174 (-)
G385589 NA non-coding downstream 464252 12469229 ~ 12469882 (-)
G386630 NA non-coding upstream 203899 13193989 ~ 13194202 (-)
G386632 NA non-coding upstream 204698 13194788 ~ 13194993 (-)
G386644 NA non-coding upstream 217309 13207399 ~ 13208074 (-)
G386705 NA non-coding upstream 303433 13293523 ~ 13322992 (-)
G386730 NA non-coding upstream 337235 13327325 ~ 13349203 (-)
garnl3 garnl3,LOC107700942 other downstream 42839 12807201 ~ 12891295 (-)
LOC113531030 NA other downstream 1235590 11691234 ~ 11698544 (-)
map1b map1b,LOC107597920 other downstream 1306448 11546309 ~ 11627686 (-)
G384960 NA other downstream 1850193 11078712 ~ 11083941 (-)
G384811 NA other downstream 2327862 10605990 ~ 10606272 (-)
selenow1 LOC103044489 other upstream 626032 13616122 ~ 13680525 (-)
ccdc84 ccdc84 other upstream 1926572 14916662 ~ 14923390 (-)
nrgna NA other upstream 2028803 15018893 ~ 15026869 (-)
gltpd2 LOC108260402 other upstream 2892248 15882338 ~ 15888059 (-)
LOC113531235 NA other upstream 3373404 16363494 ~ 16380787 (-)

Expression


Co-expression Network