Gene
RNA
| Item | Value |
|---|---|
| gene id | G386730 |
| gene name | NA |
| gene type | non-coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047621.1 |
| NCBI id | CM018567.1 |
| chromosome length | 18889892 |
| location | 13327325 ~ 13349203 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU458402 | True | 382 | lncRNA | 0.38 | 2 | 13327325 | 13349203 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| nanos2 | NA | coding | downstream | 4864 | 13321245 ~ 13322461 (-) |
| zswim7 | zswim7,LOC107712139,LOC107688637,LOC107665024,LOC107740465 | coding | downstream | 6982 | 13286852 ~ 13320343 (-) |
| si:dkeyp-72a4.1 | NA | coding | downstream | 147698 | 13162472 ~ 13179627 (-) |
| dab2ipb | dab2ip,LOC108259889 | coding | downstream | 170602 | 13023617 ~ 13156723 (-) |
| si:dkey-34e4.1 | NA | coding | downstream | 337235 | 12934134 ~ 12990090 (-) |
| aspa | aspa | coding | upstream | 135379 | 13484582 ~ 13503992 (-) |
| pho | NA | coding | upstream | 157309 | 13506512 ~ 13516580 (-) |
| LOC113531016 | LOC108260420,LOC108427286,LOC106567973,LOC103045102,LOC107712159,LOC106534416 | coding | upstream | 182110 | 13531313 ~ 13652955 (-) |
| akap10 | akap10 | coding | upstream | 306587 | 13655790 ~ 13673618 (-) |
| ehd2a | LOC108260244,LOC108427007,LOC107712157 | coding | upstream | 334147 | 13683350 ~ 13695503 (-) |
| G386705 | NA | non-coding | downstream | 4333 | 13293523 ~ 13322992 (-) |
| G386644 | NA | non-coding | downstream | 119251 | 13207399 ~ 13208074 (-) |
| G386632 | NA | non-coding | downstream | 132332 | 13194788 ~ 13194993 (-) |
| G386630 | NA | non-coding | downstream | 133123 | 13193989 ~ 13194202 (-) |
| G385758 | NA | non-coding | downstream | 499802 | 12826786 ~ 12827523 (-) |
| G386763 | NA | non-coding | upstream | 173883 | 13523086 ~ 13523322 (-) |
| G386814 | NA | non-coding | upstream | 322020 | 13671223 ~ 13672140 (-) |
| G386845 | pex12,LOC107587685,LOC107681885,LOC107710733 | non-coding | upstream | 460398 | 13809601 ~ 13827854 (-) |
| G386849 | NA | non-coding | upstream | 504634 | 13853837 ~ 13854055 (-) |
| LOC117596230 | NA | non-coding | upstream | 526814 | 13876017 ~ 13876806 (-) |
| garnl3 | garnl3,LOC107700942 | other | downstream | 436030 | 12807201 ~ 12891295 (-) |
| LOC113531030 | NA | other | downstream | 1628781 | 11691234 ~ 11698544 (-) |
| map1b | map1b,LOC107597920 | other | downstream | 1699639 | 11546309 ~ 11627686 (-) |
| G384960 | NA | other | downstream | 2243384 | 11078712 ~ 11083941 (-) |
| G384811 | NA | other | downstream | 2721053 | 10605990 ~ 10606272 (-) |
| selenow1 | LOC103044489 | other | upstream | 266919 | 13616122 ~ 13680525 (-) |
| ccdc84 | ccdc84 | other | upstream | 1567459 | 14916662 ~ 14923390 (-) |
| nrgna | NA | other | upstream | 1669690 | 15018893 ~ 15026869 (-) |
| gltpd2 | LOC108260402 | other | upstream | 2533135 | 15882338 ~ 15888059 (-) |
| LOC113531235 | NA | other | upstream | 3014291 | 16363494 ~ 16380787 (-) |
