G386763


Basic Information

Item Value
gene id G386763
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047621.1
NCBI id CM018567.1
chromosome length 18889892
location 13523086 ~ 13523322 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU458441
catccattcatccatccatccatccattcatctagcTTCAGTAGTTATTTTATCCCAGTTAGGGTTGCagtagatccagagcctatcaccggaatactgggtgtgaagcaggaatacGTTATTTGCAgagcatcatgcacacacacatgttcacaccaatttatcttagccagtccacctgcTGGTGTGTTTTCAGGAGATGGgaagaacccggaggaaacccatgtggacacagag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU458441 True 237 lncRNA 0.46 1 13523086 13523322

Neighbor

gene id symbol gene type direction distance location
pho NA coding downstream 6506 13506512 ~ 13516580 (-)
aspa aspa coding downstream 19094 13484582 ~ 13503992 (-)
abr abr,si:ch211-253h3.1,LOC103375456,LOC107731041,LOC107688618,LOC107712163 coding downstream 45861 13325782 ~ 13477225 (-)
nanos2 NA coding downstream 200625 13321245 ~ 13322461 (-)
zswim7 zswim7,LOC107712139,LOC107688637,LOC107665024,LOC107740465 coding downstream 202743 13286852 ~ 13320343 (-)
LOC113531016 LOC108260420,LOC108427286,LOC106567973,LOC103045102,LOC107712159,LOC106534416 coding upstream 7991 13531313 ~ 13652955 (-)
akap10 akap10 coding upstream 132468 13655790 ~ 13673618 (-)
ehd2a LOC108260244,LOC108427007,LOC107712157 coding upstream 160028 13683350 ~ 13695503 (-)
si:dkeyp-117b8.4 LOC108259900,LOC108428299,LOC103043164 coding upstream 180179 13703501 ~ 13707400 (-)
rsph4a rsph6a coding upstream 190354 13713676 ~ 13718102 (-)
G386730 NA non-coding downstream 173883 13327325 ~ 13349203 (-)
G386705 NA non-coding downstream 200094 13293523 ~ 13322992 (-)
G386644 NA non-coding downstream 315012 13207399 ~ 13208074 (-)
G386632 NA non-coding downstream 328093 13194788 ~ 13194993 (-)
G386630 NA non-coding downstream 328884 13193989 ~ 13194202 (-)
G386814 NA non-coding upstream 147901 13671223 ~ 13672140 (-)
G386845 pex12,LOC107587685,LOC107681885,LOC107710733 non-coding upstream 286279 13809601 ~ 13827854 (-)
G386849 NA non-coding upstream 330515 13853837 ~ 13854055 (-)
LOC117596230 NA non-coding upstream 352695 13876017 ~ 13876806 (-)
G386868 NA non-coding upstream 387940 13911262 ~ 13916801 (-)
garnl3 garnl3,LOC107700942 other downstream 631791 12807201 ~ 12891295 (-)
LOC113531030 NA other downstream 1824542 11691234 ~ 11698544 (-)
map1b map1b,LOC107597920 other downstream 1895400 11546309 ~ 11627686 (-)
G384960 NA other downstream 2439145 11078712 ~ 11083941 (-)
G384811 NA other downstream 2916814 10605990 ~ 10606272 (-)
selenow1 LOC103044489 other upstream 92800 13616122 ~ 13680525 (-)
ccdc84 ccdc84 other upstream 1393340 14916662 ~ 14923390 (-)
nrgna NA other upstream 1495571 15018893 ~ 15026869 (-)
gltpd2 LOC108260402 other upstream 2359016 15882338 ~ 15888059 (-)
LOC113531235 NA other upstream 2840172 16363494 ~ 16380787 (-)

Expression


Co-expression Network