G384811


Basic Information

Item Value
gene id G384811
gene name NA
gene type unknown
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047621.1
NCBI id CM018567.1
chromosome length 18889892
location 10605990 ~ 10606272 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU456221
CAGCAGGGCAAGATGACAGTAATTGTTGCCTACGCCCCCACTGATGTCGCTGATGAAGATGTGAAGGACGCCTTCTTCGACCAACTCCATCAGGCTGTTGGCCAAGCCCCACCACACGACATTACCATCATCCTCACTGATGCCAACGCCACTCTGTCCAGCAGTGATCGGACCACCGGCTCACCTGTCGGCACAACCTTCGTAGACAGAACCACAAACGATAATGGTAACCGCCTTCTCCTTCTCTGCCACCACGACAACCTCTGCGTCGCTGATACCTGGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU456221 True 283 TUCP 0.55 1 10605990 10606272

Neighbor

gene id symbol gene type direction distance location
ungb LOC108280186 coding downstream 94280 10507836 ~ 10511710 (-)
ppp6c ppp6c,Ppp6c,LOC107587376,LOC107681855,LOC100380848,LOC107093923,LOC106570422,LOC102313764,LOC100701794,LOC102783418 coding downstream 127266 10460316 ~ 10478724 (-)
scai scai,LOC107740943 coding downstream 146192 10387883 ~ 10459798 (-)
zmat5 zmat5 coding downstream 248892 10349022 ~ 10357098 (-)
m17 LOC108271423 coding downstream 339244 10263922 ~ 10266746 (-)
coro1cb coro1c,LOC108280777,LOC107740952,LOC108413414 coding upstream 84972 10691244 ~ 10782990 (-)
mcc mcc,LOC106565572 coding upstream 228185 10834457 ~ 10981914 (-)
LOC113523726 NA coding upstream 540859 11147131 ~ 11151024 (-)
mvb12ba mvb12b,mvb12ba,LOC107557586,LOC107654329 coding upstream 749402 11355674 ~ 11452919 (-)
foxd1 foxd1 coding upstream 1383805 11990077 ~ 11991776 (-)
G384806 NA non-coding downstream 7607 10598127 ~ 10598383 (-)
G384804 NA non-coding downstream 10925 10594841 ~ 10595065 (-)
G384799 NA non-coding downstream 18411 10587348 ~ 10587579 (-)
LOC113531332 NA non-coding downstream 21955 10581287 ~ 10584035 (-)
G384792 NA non-coding downstream 28758 10577016 ~ 10577232 (-)
G384849 NA non-coding upstream 75948 10682220 ~ 10682423 (-)
G384850 NA non-coding upstream 77123 10683395 ~ 10683604 (-)
G384917 NA non-coding upstream 131623 10737895 ~ 10738299 (-)
G384922 NA non-coding upstream 167176 10773448 ~ 10773716 (-)
G384925 NA non-coding upstream 178720 10784992 ~ 10785310 (-)
LOC113531664 NA other downstream 1350545 9240716 ~ 9255445 (-)
f11r.1 f11r other downstream 1521906 9073752 ~ 9084084 (-)
ubash3ba ubash3b,ubash3ba,LOC108259961,LOC106602883,LOC107597727,LOC101074361 other downstream 1535731 9020715 ~ 9070259 (-)
LOC113531288 NA other downstream 1597304 8919410 ~ 9008686 (-)
timm8b timm8b,LOC107598437,LOC107717885 other downstream 1766226 8837678 ~ 8839764 (-)
G384960 NA other upstream 472440 11078712 ~ 11083941 (-)
map1b map1b,LOC107597920 other upstream 940037 11546309 ~ 11627686 (-)
LOC113531030 NA other upstream 1084962 11691234 ~ 11698544 (-)
garnl3 garnl3,LOC107700942 other upstream 2200929 12807201 ~ 12891295 (-)
selenow1 LOC103044489 other upstream 3009850 13616122 ~ 13680525 (-)

Expression


Co-expression Network