fkbp15a (fkbp15)


Basic Information

Item Value
gene id fkbp15a
gene name fkbp15
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047621.1
NCBI id CM018567.1
chromosome length 18889892
location 9707216 ~ 9728615 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026921642.2
ACCTGCACCTGGTAGCGTGACGTCACCGGCCACCTGCATCGCGGAAAGCAGCGGCGTCCTCGCGTGCGCTGGGTTTTAGGGACGAGCGCGTGCCCTGCAGtgtctctgtgcctctctctctctctctctctctctctctctctctctctctctctctctctctctctgtgctgaggatgaaagaaattaaagatatttttccTGATTATCACGACGGGGAGTTTCTGGCTCCTAAAAGCGGGGCGAAGCTGGCCTCTCTCTTTGGTCTCTGCCAAGCTGAGTCTGAAGGAAATGATTCTTTCAAGTTCACTGCCCCCAAGCAACCCAAAAAAGTCCCCTCTACTCTTGGTCCACCTTCTCAGAAACAAGCCCCTCCTCCAACAGCACCAGCTGTCTTATTGGCTGTTGCTGTCCATGCGTTTCACTTTGTGAATGGACAATACGTGAAGCATGGCAAGTTGGGAGCAGCCATCCTGGGAAACCATGTGACTAAAGAGTATAAAGTCCTGCTGTATGGGAGTCAACAGAAACAAATCACTACAGCACGAATCCATCATGGATTTGTCCTCACGGTTCAGACTGGGAACTACACTGCCTTCTATGATGATCAGCGGCAGAGCTGGTCTGTGAAGTTCGACTCGGAGGAAGCTAGgatagatttctgtaaagagGTTTGTGTGGCCAAGTGGAACAGTCAGACCTGCAGGGACACTCTGCTGACTCAGGACTTGGTCCATGGAGAGGGACAGACCATCAGCATGGGGGACACAGTGGAGGTGGCCTTGTCTAGCTGGCTGCTTCAGAATCATGCTGTGCGACAGttatttGATTCCAACTCGTGTAAAGACGAGCTCCAGCGAGTGAGCCTGGGCTCTGACACGGCTATGATGGGATGGGAAAAGGGGATGTTAGGGATGCAGAAAGGAGGTCGACGTCTTATAATTGTTCCCCCCAGCATGGGTTATGGATCAAAAGGCGTTCCACACCGTGTACCACCTTCTAGCACACTAGTGTTTGCCGTGGAGGTTCATCAGGTTAATTTCTCCAAAGATGCAGATTGCCTTGCTGCAGGATCTACACACCGCAACAAGTCTCTAGTCCCTGGTCTAGACAGAATAAATATTGAGAGTTCAGTCCAGTCTGCTTTGAGCTGCTCGGACCAAGGAGATCAAGCTCAGTGGGTTAAGTGCAGAACTCTAAATGAGCTTCCAAAGCTTCCAGATGCAGACAAAGCAAAGCTAATCTCCCGCATGGCTAAAATGGGCCAGCCCACGTTGCCTTTCCTGAAAGTACCAGCTCAACCAAGTGACCCTGCGATAGAGGAAAGCAGAGAGTCTGCGTCAGTGTGTGGTTCGTCAGCCCAAGCCGCTTCTTCATCTCTACTGCCTGTAGAAACAGCTTCCTCAGTATCATCATCCGCTGCCGTCCAACACCCAGAGGCAGTGAATACACGCACAGCTCAGGAGGTGCAAGTCTGCTCAGATCGAGCTTTCCAGCCTTATTCTGCATCACAGCTGCAACCTTTCACATTAACCTTTCCACCCCAGCACACACCATACCTGACTGACATTGGCTCCTTCATGATGACTGAGGCACGGCAGCACAATACTGAAATCCGGTTAGCTGTTGCAAGAGTGACTGACAAAGTTGACTACTTGGCTTCTAAGGTGGATGAACTACATAAGCAAGGTATCTGCTCTTTTGCTCTCTCCAGTGGATCTCTGGAAACAACCATGATCTTGCACAATATACAGAGAATTATTCAGGAAAATGCCAGTCTGAAGAAGGAGGTTCTAGAGAAGGGCTCTAGAGTGGAGGAACAGGACTGTAAAATAGGAGAGCTCATTGAACAGAGgtgtatGGAGAAAAGCAGCTTGCTGTTGGAACAGACAAATGACGTTCTTCAGAGCAGCAGTCATCATGCCAGGCTTCTAAAAGCTGAACAGGAGAAGTTCCCTGTACAGAGAAAAGAATCAGTCACTTCTAATGAAAACCTGAAGGAGCGTTTGGCTGAAGAGTTGGACGCGTCCTCTTCTCGTGTGTGTAAGCTGCAGCAGGAGGCAGATGGTCTCCAGCAGAGGGTGACGGAGCTGCAAGCCGAGCTCAGTGCCGTCCTGCAGGAAAGCCAGAGCCGCTGTGCTCTAATCAGTTCTCTGGAGTCTAAGGTGGAAGAGTTGAAGAAGGAGGTTGCGCAGTCTCAGCAGCAgtggagagaagagaaacagaagtGCAGAAAGATGGAATGGAAAATGACGAACATGGAGGAGGAGATCCAAGACCTGAGGGCAGAGAATGAGAGCGTtacccagCTGCTGtcagacaggaagaggaagtggcAGCAGGAACGGGAGCGCTTTCTGCTGGACCAGGAGGAGCAGCGCAGCAGCAGTGAGCAGGAACAACAGCATCTCCTTGACCAGCTCAGGAAAGCCCGAGTCCATGCTGGAACACACAGCAGACCACAGCTTGAGCTGGAGTGGCAGGAGAGGTGTGATGCAGTACTGAAGGAGCAGAAATTAAAACTAGAAGAAGTGATTTCTCAGCTACAAAAACAGAATGAAAAATTACAAGAGGAActggagaaagacagacagcaaCTTGAGGCCCAGCTGGCTGTACAGGTGAAATGGGTGATGAATGGGCTGTTCCGCTCTCTGAGGGCAGAGTTTGATCTGCAGGAGTCTTATTCTGGTGAATCTGTCCTAAAGATAGTCCTCAGCACCATCAAGtgtgtGACCATGCGATTCCTTAAGGAGCAAAAgtcggaggaggaggaggaggaggaggaggaggaggagtacaTCTCTGCAGAGGAGAGCCCGAGTGGAAGAATGGAAGAACATGGAATAAAAAGTGAGGAAATGGAAAGCCCCCAGAGCCTAGACCGCACCTATGTGACAGCATATGAAAGCAACAGTCTAGAAGCCTCTGAAGTGAGCAGGGATTCTTCATTAGCTTCAGATGTAGAGAAGCAGCCATTGAACCTCACTGAGTGAAGGGTTTGAAAATGAGATCCGATGTTAATCGTAACTGGAGACATAAATTAGATGTAAAAAATCCAGTAATTGGAACCTGCACTCATTCACTCAATGACTGTTCCAAAAGGGCAATTAGAGGTGGTGTAGGACAGGACGGTCAAACTCCAGCCTGTTTACACACACTGGATCAacttgctgttttttcttttaccaGGTTAGTAGTGTCTGATaacaagaaaatataaaaatgaataagaaatttTTGAGCTGGATAATCACTACAATCATCACTACTATCACCATGATTTTGTATTAGAAAATGACTTTCTATGCTGGAATAGTTGCAGAACTTTAATTATATTGTATAGGTTATATttatatgaacagatttaatgTCTTCACATTGCTCTGTTTATATTTCTTTGACCTGAGtataaaatagtatttttttttaatgtaataaaacagcATATATAACAAGACTAGGTAAGAAGTTAATATGTAATTTACAGTTGTATTTAGTATGTTAAAGATTATTTTAAGAACATTTTAGATATGAATGGACACTGCATAGACATACTGTAAGGTgagtttattttgaatattcatAACACTACccacaacaataacaaaattgCATGAGATCTATCAGAATGTCAAAGTTacttaaataatatataataattcttATAGAGTCTGTTGAGAGAAGTTTCAAAATGACTATTTCACATTTAAGGCAAAAACATGCACAGTATGTCTTACAGGAATTACACAGCCTTGGTCTTATGcaaagtgtttcagtgttttcacaATGATTAGTTAGTCAAAGTTAATGAAATGGAACACAGTATATAATCGCTGCTGATTTTGCTTTTGCTACACGAGTCTCTATCTCTATCCAGGTCTGATTAGCAGAATGTGATTGCATTAGATAAGCCTTCTTATTTTGGAATATGGAACATTTCACAATAAGCCTTAAAACCACATACAGGGATACATGTGTGACGACAGCAACATTGAGTAGTGCGTAAGTACAAGTGAGTGCTTTGGGAgcagatttttatatttaaaatgatttgacATGCTTATGCAGTACTGTGCGAAAGTCTTGGGCCTCCTGAGAAATGCAAGTTATCAAGCTTTATCAAGTCTCCACCATACATCACTACaatcaataaaaatgaacaatatgtTAATTACTACAACAAAACTAAGGTATTTATGTGAGCTTTGGTAGAATTGTATGTTCTTTCCTTTAAGTCAATGACTGCTGCTTTTCCCTTTCCCACACAGCGGCTCTTACGCTCAGCTGAACGCTCTGAGATAGATGATTTAATACTGCACACGACCATCACACTGCCACCCACAC
>XM_026921643.2
ACCTGCACCTGGTAGCGTGACGTCACCGGCCACCTGCATCGCGGAAAGCAGCGGCGTCCTCGCGTGCGCTGGGTTTTAGGGACGAGCGCGTGCCCTGCAGtgtctctgtgcctctctctctctctctctctctctctctctctctctctctctctctctctctctctgtgctgaggatgaaagaaattaaagatatttttccTGATTATCACGACGGGGAGTTTCTGGCTCCTAAAAGCGGGGCGAAGCTGGCCTCTCTCTTTGGTCTCTGCCAAGCTGAGTCTGAAGGAAATGATTCTTTCAAGTTCACTGCCCCCAAGCAACCCAAAAAAGTCCCCTCTACTCTTGGTCCACCTTCTCAGAAACAAGCCCCTCCTCCAACAGCACCAGCTGTCTTATTGGCTGTTGCTGTCCATGCGTTTCACTTTGTGAATGGACAATACGTGAAGCATGGCAAGTTGGGAGCAGCCATCCTGGGAAACCATGTGACTAAAGAGTATAAAGTCCTGCTGTATGGGAGTCAACAGAAACAAATCACTACAGCACGAATCCATCATGGATTTGTCCTCACGGTTCAGACTGGGAACTACACTGCCTTCTATGATGATCAGCGGCAGAGCTGGTCTGTGAAGTTCGACTCGGAGGAAGCTAGgatagatttctgtaaagagGTTTGTGTGGCCAAGTGGAACAGTCAGACCTGCAGGGACACTCTGCTGACTCAGGACTTGGTCCATGGAGAGGGACAGACCATCAGCATGGGGGACACAGTGGAGGTGGCCTTGTCTAGCTGGCTGCTTCAGAATCATGCTGTGCGACAGttatttGATTCCAACTCGTGTAAAGACGAGCTCCAGCGAGTGAGCCTGGGCTCTGACACGGCTATGATGGGATGGGAAAAGGGGATGTTAGGGATGCAGAAAGGAGGTCGACGTCTTATAATTGTTCCCCCCAGCATGGGTTATGGATCAAAAGGCGTTCCACACCGTGTACCACCTTCTAGCACACTAGTGTTTGCCGTGGAGGTTCATCAGGTTAATTTCTCCAAAGATGCAGATTGCCTTGCTGCAGGATCTACACACCGCAACAAGTCTCTAGTCCCTGGTCTAGACAGAATAAATATTGAGAGTTCAGTCCAGTCTGCTTTGAGCTGCTCGGACCAAGGAGATCAAGCTCAGTGGGTTAAGTGCAGAACTCTAAATGAGCTTCCAAAGCTTCCAGATGCAGACAAAGCAAAGCTAATCTCCCGCATGGCTAAAATGGGCCAGCCCACGTTGCCTTTCCTGAAAGTACCAGCTCAACCAAGTGACCCTGCGATAGAGGAAAGCAGAGAGTCTGCGTCAGTGTGTGGTTCGTCAGCCCAAGCCGCTTCTTCATCTCTACTGCCTGTAGAAACAGCTTCCTCAGTATCATCATCCGCTGCCGTCCAACACCCAGAGGCAGTGAATACACGCACAGCTCAGGAGGTGCAAGTCTGCTCAGATCGAGCTTTCCAGCCTTATTCTGCATCACAGCTGCAACCTTTCACATTAACCTTTCCACCCCAGCACACACCATACCTGACTGACATTGGCTCCTTCATGATGACTGAGGCACGGCAGCACAATACTGAAATCCGGTTAGCTGTTGCAAGAGTGACTGACAAAGTTGACTACTTGGCTTCTAAGGTGGATGAACTACATAAGCAAGGTATCTGCTCTTTTGCTCTCTCCAGTGGATCTCTGGAAACAACCATGATCTTGCACAATATACAGAGAATTATTCAGGAAAATGCCAGTCTGAAGAAGGAGGTTCTAGAGAAGGGCTCTAGAGTGGAGGAACAGGACTGTAAAATAGGAGAGCTCATTGAACAGAGgtgtatGGAGAAAAGCAGCTTGCTGTTGGAACAGACAAATGACGTTCTTCAGAGCAGCAGTCATCATGCCAGGCTTCTAAAAGCTGAACAGGAGAAGGAGCGTTTGGCTGAAGAGTTGGACGCGTCCTCTTCTCGTGTGTGTAAGCTGCAGCAGGAGGCAGATGGTCTCCAGCAGAGGGTGACGGAGCTGCAAGCCGAGCTCAGTGCCGTCCTGCAGGAAAGCCAGAGCCGCTGTGCTCTAATCAGTTCTCTGGAGTCTAAGGTGGAAGAGTTGAAGAAGGAGGTTGCGCAGTCTCAGCAGCAgtggagagaagagaaacagaagtGCAGAAAGATGGAATGGAAAATGACGAACATGGAGGAGGAGATCCAAGACCTGAGGGCAGAGAATGAGAGCGTtacccagCTGCTGtcagacaggaagaggaagtggcAGCAGGAACGGGAGCGCTTTCTGCTGGACCAGGAGGAGCAGCGCAGCAGCAGTGAGCAGGAACAACAGCATCTCCTTGACCAGCTCAGGAAAGCCCGAGTCCATGCTGGAACACACAGCAGACCACAGCTTGAGCTGGAGTGGCAGGAGAGGTGTGATGCAGTACTGAAGGAGCAGAAATTAAAACTAGAAGAAGTGATTTCTCAGCTACAAAAACAGAATGAAAAATTACAAGAGGAActggagaaagacagacagcaaCTTGAGGCCCAGCTGGCTGTACAGGTGAAATGGGTGATGAATGGGCTGTTCCGCTCTCTGAGGGCAGAGTTTGATCTGCAGGAGTCTTATTCTGGTGAATCTGTCCTAAAGATAGTCCTCAGCACCATCAAGtgtgtGACCATGCGATTCCTTAAGGAGCAAAAgtcggaggaggaggaggaggaggaggaggaggaggagtacaTCTCTGCAGAGGAGAGCCCGAGTGGAAGAATGGAAGAACATGGAATAAAAAGTGAGGAAATGGAAAGCCCCCAGAGCCTAGACCGCACCTATGTGACAGCATATGAAAGCAACAGTCTAGAAGCCTCTGAAGTGAGCAGGGATTCTTCATTAGCTTCAGATGTAGAGAAGCAGCCATTGAACCTCACTGAGTGAAGGGTTTGAAAATGAGATCCGATGTTAATCGTAACTGGAGACATAAATTAGATGTAAAAAATCCAGTAATTGGAACCTGCACTCATTCACTCAATGACTGTTCCAAAAGGGCAATTAGAGGTGGTGTAGGACAGGACGGTCAAACTCCAGCCTGTTTACACACACTGGATCAacttgctgttttttcttttaccaGGTTAGTAGTGTCTGATaacaagaaaatataaaaatgaataagaaatttTTGAGCTGGATAATCACTACAATCATCACTACTATCACCATGATTTTGTATTAGAAAATGACTTTCTATGCTGGAATAGTTGCAGAACTTTAATTATATTGTATAGGTTATATttatatgaacagatttaatgTCTTCACATTGCTCTGTTTATATTTCTTTGACCTGAGtataaaatagtatttttttttaatgtaataaaacagcATATATAACAAGACTAGGTAAGAAGTTAATATGTAATTTACAGTTGTATTTAGTATGTTAAAGATTATTTTAAGAACATTTTAGATATGAATGGACACTGCATAGACATACTGTAAGGTgagtttattttgaatattcatAACACTACccacaacaataacaaaattgCATGAGATCTATCAGAATGTCAAAGTTacttaaataatatataataattcttATAGAGTCTGTTGAGAGAAGTTTCAAAATGACTATTTCACATTTAAGGCAAAAACATGCACAGTATGTCTTACAGGAATTACACAGCCTTGGTCTTATGcaaagtgtttcagtgttttcacaATGATTAGTTAGTCAAAGTTAATGAAATGGAACACAGTATATAATCGCTGCTGATTTTGCTTTTGCTACACGAGTCTCTATCTCTATCCAGGTCTGATTAGCAGAATGTGATTGCATTAGATAAGCCTTCTTATTTTGGAATATGGAACATTTCACAATAAGCCTTAAAACCACATACAGGGATACATGTGTGACGACAGCAACATTGAGTAGTGCGTAAGTACAAGTGAGTGCTTTGGGAgcagatttttatatttaaaatgatttgacATGCTTATGCAGTACTGTGCGAAAGTCTTGGGCCTCCTGAGAAATGCAAGTTATCAAGCTTTATCAAGTCTCCACCATACATCACTACaatcaataaaaatgaacaatatgtTAATTACTACAACAAAACTAAGGTATTTATGTGAGCTTTGGTAGAATTGTATGTTCTTTCCTTTAAGTCAATGACTGCTGCTTTTCCCTTTCCCACACAGCGGCTCTTACGCTCAGCTGAACGCTCTGAGATAGATGATTTAATACTGCACACGACCATCACACTGCCACCCACAC

Function

symbol description
fkbp15 Predicted to enable actin binding activity and peptidyl-prolyl cis-trans isomerase activity. Predicted to be involved in endocytosis and protein peptidyl-prolyl isomerization. Located in membrane.

NR:

description
E3 ubiquitin-protein ligase LRSAM1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026921642.2 True 4347 mRNA 0.45 27 9707216 9728615
XM_026921643.2 False 4299 mRNA 0.45 26 9707216 9728615

Neighbor

gene id symbol gene type direction distance location
rpl12 rpl12,LOC107597107 coding downstream 19526 9682276 ~ 9687690 (-)
LOC113531681 NA coding downstream 22443 9684647 ~ 9684773 (-)
LOC113531679 NA coding downstream 22818 9684272 ~ 9684398 (-)
LOC113531682 NA coding downstream 24111 9682981 ~ 9683105 (-)
LOC113531680 NA coding downstream 24483 9682607 ~ 9682733 (-)
crata crat,crata coding upstream 1120 9729735 ~ 9742891 (-)
ier5l ier5l,LOC108228905 coding upstream 37125 9765740 ~ 9768035 (-)
ndor1 ndor1 coding upstream 260162 9988777 ~ 10004503 (-)
c9 c9 coding upstream 418424 10147039 ~ 10163600 (-)
m17 LOC108271423 coding upstream 535307 10263922 ~ 10266746 (-)
LOC117596221 NA non-coding downstream 280947 9424980 ~ 9426269 (-)
LOC117596217 NA non-coding downstream 390611 9311773 ~ 9316605 (-)
LOC113531656 LOC106579430,LOC107088658 non-coding downstream 448400 9256495 ~ 9258816 (-)
G384027 NA non-coding downstream 489018 9217990 ~ 9218198 (-)
G384020 NA non-coding downstream 498381 9208632 ~ 9208835 (-)
G384260 NA non-coding upstream 51968 9780583 ~ 9786099 (-)
G384271 NA non-coding upstream 67311 9795926 ~ 9796654 (-)
G384280 NA non-coding upstream 84392 9813007 ~ 9813223 (-)
LOC117596261 NA non-coding upstream 319357 10047972 ~ 10050220 (-)
LOC113531315 NA non-coding upstream 440499 10169114 ~ 10171595 (-)
LOC113531664 NA other downstream 451771 9240716 ~ 9255445 (-)
f11r.1 f11r other downstream 623132 9073752 ~ 9084084 (-)
ubash3ba ubash3b,ubash3ba,LOC108259961,LOC106602883,LOC107597727,LOC101074361 other downstream 636957 9020715 ~ 9070259 (-)
LOC113531288 NA other downstream 698530 8919410 ~ 9008686 (-)
timm8b timm8b,LOC107598437,LOC107717885 other downstream 867452 8837678 ~ 8839764 (-)
G384811 NA other upstream 877375 10605990 ~ 10606272 (-)
G384960 NA other upstream 1350097 11078712 ~ 11083941 (-)
map1b map1b,LOC107597920 other upstream 1817694 11546309 ~ 11627686 (-)
LOC113531030 NA other upstream 1962619 11691234 ~ 11698544 (-)
garnl3 garnl3,LOC107700942 other upstream 3078586 12807201 ~ 12891295 (-)

Expression


Co-expression Network