adamts15a (LOC108260351)


Basic Information

Item Value
gene id adamts15a
gene name LOC108260351
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047621.1
NCBI id CM018567.1
chromosome length 18889892
location 8755639 ~ 8775242 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026922045.2
GTGCGCTTCAACGATGATGTCGCGAGCAGAGAGGCGCTAGCCAATCAGCTCAACCGAAGACCTTCCTCAAAAGCTCCGGTGACAGGCACTCGCTGTTTACACATGACCTGCGCGCATAAAGCCAGCGCACGCGGAAGGACGCTTGAGCATCCAGGTGCAACAAGGGAATGGATCGAACGCTCGCAGGCGACATTTTAGTCCGTCTCCGTTATTCGGATTATTCTTAAACGCACTGATTAAATACCTTAAAACTGGTTCATTTTTTCCCAAGATTGCGTCCTGTCCCTTCTCGTCCGTAGAAATCTTACAGCATTTTGCATGCAgtcatgtttttattcacaAGGGCTGTGCTTTTTGTGAACGTTTTATTAGTGATTTGCAAATTTGCGCGCTCCATGCAGAGTCAGCTGTGCGAACCTGTCAGAGTGGATAATCATGACTATGCAAATAACAACTTTGTCGGTTCTGAAATGAACGCACCGCCGAAAAAAGTGGCTTACCAAGTAAGTGCGTTTGGACAGGATTTTGTGCTCGACTTGCACACGGATTCTAGCTTCATCGCACCCACGCTGTCGACGTTGGGCATGCCCCTTGGGTCCGAGCGCGCGGACCTTCGGCGCTGTTTCTACGCGGGCACCGTGAATTTGGATCCACTCTCGTACGCGGCTCTCAGTCTGTGCGACGGCCTGCGCGGCGCGTTTGGCTACGACGGCTGGGAGTATTTTATCAATCCGGCAAGCGACGACTCAGTGTCTTCGGGTGCGCGCCGGAGCGCGGAGAGCGCGCACCTTCTGCGGCGACGCGCCAACGCCGAGCTTGGTGGCAACGGCACGACGCGATGTGGCGTAGACGGTGGCCCGACGCCCGATGTCGCACGCTCCCTGGAGAAGTTTAAACGCTCCGAAGAAGCTAATGCTGGCGTTAAAACCAACGCACAGAGGAGTCGGCTCAAGCGATTCGCATCGGTGCCTCGGTACGTGGAGACGCTTGTGGTGGCCGACGAGTCCATGGCCAATTTCCACGGTGACGATCTGAGGCATTACGTGCTTACACTCATGGCAGTGGCGGCTCGCCTCTACAAACACCCAAGCATCCTGAACCCCATTAACATCGTGGTGGTCAAGTTCCTGGTGGTTACCGACGAGGATAAAGGGCCCAAGGTGACCGGCAACGCAGCCATGACCCTGCGCAATTTCTGTACGTGGCAAAAGAAGATCAACAAGAACAGCGACAAGCACCCGGAGTATTGGGACACCGCCATCCTGTTCACCAAAGAGGATCTGTGTGGAGCCTCCACGTGTGACACTCTGGGCATGGCAGACGTTGGCACAATGTGTGACCCAAAGAGGAGCTGCTCAGTGATCGAGGATGATGGCTTGCCTTCTGCATTCACCACTGCTCACGAGCTTGGCCATGTATTCAACATGCCCCATGATAACGTGAAGGCATGTGAGGATGTATTTGGAAAGCTACAGGACAATCATATGATGTCACCGACACTGATCCGGATAAACCGCACCAGCCCATGGTCACCGTGTAGTGCTGCTATCATCACAGAATTCCTGGACAGCGGACATGGTGATTGTTTATTGGATCAGCCTGAGAAACCCTTGTCACTACCTGACGTTCTCCCTGGAGTGTCATATGGTCTAGAGAGGCAGTGTGAGCTGTCTTTTGGCACTGGTTCGAAGCCATGCCCACTCATGCAGGCACCGTGCCAGCGGCTGTGGTGCACAGGCAAGACCCGGGGTCAGCCTGTCTGTCAGACACGGCACTTCCCCTGGGCAGATGGCACAGCATGTGGAGAGGGCATGCTGTGCATGCGTGGGGTTTGCATAGAGAAACACGAGATCACCAGGCCAAAGgTGGATGGAAAGTGGGGTAAATGGGGGACATTCGGGCCTTGCTCCAGAACCTGTGGTGGTGGAGTGCAGCTCGCAAAAAGAGAGTGCAGTAATCCAGTGCCAGACAATGGGGGCAAATACTGCCAAGGAGTGAGGGTGAAGTACCGGTCCTGCAACCTCACACCATGCCCAGACACTGGGAAGAGTTACAGAGAGGAGCAGTGTGAGGCTTTCAATGGCTTCAGTCTGAACACCAACCGCCTCACGCCGTCTGTGGTGTGGGTGCCTAAGTACTCAGGCGTCTCCCCTAAAGACCAGTGTAAGCTGATATGCAGGGCTAATGGAACAGGCTACTTCTACGTCCTCGCTCCCAAGGTTGTGGATGGGACTCCATGTTCTCCTGACTCTTCAGGAGTTTGTGTTCAGGGCAAATGTAGCAAGGCGGGCTGTGATGGTAAACTCGGCTCCAGCAAGAAGTTTGACAAATGTGGTGTCTGTGGAGGAGACAATAAGAGCTGCAAGAAGATTTCTGGCCTCTTCACGAAACCTGTTCCCGGCTACAACTTTGTCGTCATGCTTCCAGTGGGTGCGTCCAATGTTGACATCCGTCAGCGTGGCTATAAGGGAATGGTAAATGATGACAACTACCTGGCTGTCAAGAACAGCCGAGGTGAATACCTTCTTAATGGCAACTATATAGTGTCAGCAGTGGAGCGGGACATCATAGTGCGTGGCAGTCTCTTGCGCTACAGCGGCACCAGCGGCCAATCAGAGACGCTGCAGGCTGTAAGACCACTGGGGGAAGCTCTGACGGTGGAGGTGCTGTCTGTGGGCCACTTAACACCTCCACGCATCCGCTATTCCTTCTATCTCAAACGAGAAACCAAGGAGGACAAGGTGTTAAAGAAGGAAGGCAGGACTCTGGCTGAAAACAGCGTTCTCGCTGAGGAGGGAGGGCTTGGGAAAGAAGCCGATCCCCTCAATAAAAAGATTCCACCTCCGTACGTCAAAGAGACTCCACCCCCTGGGAAATGGGTGGCTACTGGGTGGGAGGAGTGCTCAGTGACCTGTGGGAATGGCCTGCAGAGGAGATTGGTACAGTGCATAAAAGGAGACAGCACTCCTGGGACAGACTGCGATCCAGCCAAAAGGCCCAGTGCATTGCGGGTTTGTGGTGACCCATGCCCAGTATGGCATATAGGTGAGTGGTCCCCTTGTTCCAAGACATGTGGCAAAGGCTTCAAACGGCGCCCACTCCGCTGTGCCACTGAGACGGGCATGGTGCTTCCCAGGGATCACTGTGTGAGCATGAAGAAGCCACAGGAGCTAGACTTTTGTTCGTTAAAACCCTGCTAATGACTCCTTTTCCCACAGTACTTCACCTTCCATGTTAACTCCTTTCATGGACTTGTCACTTTGTTAAACAATATACTCAACAAACGAAGAACAGTTAAAAGTTAAACGATCCGGAACTTTATTTGTTCTGGTGcatcttggtttttttttgtcttgcctGCAAAAGAGAAgtgacatgaagaagaagaaaaaactgtTACAAAATTGCCATGTAGGCTAACTTAAATGCCGATCATCTTTTGGGCTAAAAAGAAACATTCCACAGAGTCAAAAAAGTAGCACAGAAATTGCCCTTGTACTGCATGTCCTCCTTAAATCCCTCTTGTGTTAATGCCTCAGAAGGGTCCAGAGTGTCTGGTGAGAGACTGGGGTCAGGTTTCATATAAACAGAGCATGATTTAATTGTTTGATCATTTTCTGTTATCAGTTGAAAACATTAGTTAGTCCTGTTGAATATTCCCTGAATAGTCTACTTGAATATTCCTGGCATAATAAACATTGAGAGAATGCCAGAGTGCTGGAGCAGCAGGAAATTGTTGATTCCCTCCAAGACCTTATTTTGTAGGAGAAAAGTTCTGTCAATTTGTTGTTATTTCTTAGTGATTAGAACTTTCATGCCTTTTAAAACAAGGTACGGCATCACCAATCTACACACCAAATATCACATAGACCTATATAAAAGCTGACGAAAAGGATTCCAACTTAAAAGGATTCAATTATCTTTATATTAGCATATTAATCTTTTTCCTGAATCTCAACAGTAGGTCATTTATCTATAGTTCAGGAGAGACAGTTTACCCTTAGAGTCCAGCCCTGTTTATTCTGCAAACTGTGCCTCCAAGACAGGTTCTTTATCTCAGTTAGTCATCCAACatctcatttgtttttattttatcctcTCTTTCCAGTGAGACAGAGGTACAGCTGCTATAATCAAGCCCTGTCTGGTACAGTAACTAAGTTATTATTATAGCAATGTCTTTTGATGGCTTATGCCACGAAGCATGGTTTTGTGCCGGATGCCAACCTGGTAAACTGACTTTTGTACACAGTGTAAATTCATTTAATGcataatacagtaaaaaaatatatgtgtgtgaggttCTTTGGAGCGACCATATCGTCCATCTAAAAGATGGTTCCTATATGACTTGgaatgttttatccatttttttcttttgcactttAGTACAGCAAAAGAGTTCAACGTCCTGCATGGGCTGCCTTGTATACCATGTATACATCCATCTAGCTGTGCACAAATAAGTCCTGTAAATACCTTtctattttatgtatttttttacgCTGACATTTTGAATTGTCATGACTTCAAGGTATTTATTCCAAATAAAACATGTACTAACGAGATGCTTTATCA

Function

NR:

description
A disintegrin and metalloproteinase with thrombospondin motifs 15-like

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0004222 metalloendopeptidase activity molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
K08629 ADAMTS15; a disintegrin and metalloproteinase with thrombospondin motifs 15

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026922045.2 True 4578 mRNA 0.49 8 8755639 8775242

Neighbor

gene id symbol gene type direction distance location
c27h11orf53 c28h11orf53,cunh11orf53,LOC107597648 coding downstream 165112 8580097 ~ 8590527 (-)
stk36 LOC108260317,LOC108271363,LOC107722762,LOC107598122 coding downstream 176194 8567285 ~ 8579445 (-)
hmbsa hmbs,hmbsa,LOC107717875,LOC107722788 coding downstream 273186 8467213 ~ 8482453 (-)
dpagt1 dpagt1,LOC107587348,LOC107722798,LOC107717886,LOC107597531 coding downstream 339459 8407590 ~ 8416180 (-)
abcg4a abcg4,abcg4a,LOC108261268,LOC108429752,LOC107717882,LOC107722792,LOC107677424,LOC107587350 coding downstream 376197 8352400 ~ 8379442 (-)
usf1l LOC108259962,LOC103042741 coding upstream 314485 9089727 ~ 9101289 (-)
thy1 NA coding upstream 330334 9105576 ~ 9108781 (-)
si:ch211-215c18.3 NA coding upstream 338202 9113444 ~ 9123479 (-)
timm22 timm22,LOC107740820,LOC107665041,LOC107731058,LOC107688620,LOC107587673 coding upstream 513769 9289011 ~ 9292581 (-)
ptges ptges,LOC107710751,LOC107693847,LOC107587481,LOC107726289 coding upstream 525932 9301174 ~ 9308503 (-)
G383538 NA non-coding downstream 205105 8549013 ~ 8550534 (-)
G383537 LOC108260305 non-coding downstream 208175 8547182 ~ 8547464 (-)
G383536 NA non-coding downstream 209325 8545431 ~ 8546314 (-)
G383532 NA non-coding downstream 215028 8539152 ~ 8540611 (-)
G383533 NA non-coding downstream 216650 8537944 ~ 8538989 (-)
G383629 NA non-coding upstream 1009 8776251 ~ 8776573 (-)
LOC117596239 NA non-coding upstream 39419 8814661 ~ 8832279 (-)
G383841 NA non-coding upstream 320443 9095685 ~ 9097398 (-)
G383893 NA non-coding upstream 396596 9171838 ~ 9172118 (-)
G384007 NA non-coding upstream 411409 9186651 ~ 9186880 (-)
G383467 h2afx,LOC106516344,LOC107677420,LOC104950138,LOC100693699,LOC108260105,LOC106527800 other downstream 288627 8466359 ~ 8467012 (-)
hinfp hinfp,LOC107677425,LOC107662995 other downstream 357284 8382695 ~ 8398355 (-)
pdzd3b LOC108260234 other downstream 407370 8338508 ~ 8348269 (-)
atp2a3 atp2a3,LOC107587360,LOC107597397,LOC107712375,LOC107664518,LOC107748501 other downstream 768906 7889060 ~ 7986733 (-)
camkk1a camkk1,LOC107664416,LOC107587369,LOC107664519 other downstream 859910 7799638 ~ 7895729 (-)
timm8b timm8b,LOC107598437,LOC107717885 other upstream 62436 8837678 ~ 8839764 (-)
LOC113531288 NA other upstream 144168 8919410 ~ 9008686 (-)
ubash3ba ubash3b,ubash3ba,LOC108259961,LOC106602883,LOC107597727,LOC101074361 other upstream 245473 9020715 ~ 9070259 (-)
f11r.1 f11r other upstream 298510 9073752 ~ 9084084 (-)
LOC113531664 NA other upstream 465474 9240716 ~ 9255445 (-)

Expression


Co-expression Network