XLOC_005653


Basic Information

Item Value
gene id XLOC_005653
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 20646 ~ 23175 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00013375
CCGCTACAGAAATACAGATGAactcagtggtgtgtgtgtgtatataatgtttgtgtgtgtttatagactcttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttcagctgccgcttgttcacacacacaaacacacacacacgcacacacagtcagCTGATTGTTGCTCTAGTGCAGGTGTTCGTCAGTGAACTCATTCAGTGCTGCTGCAGCGGCTCTAACTGATGatccacagtgtgtgtgtgtgtgtgtgtgagagagttagATCCactgatgatgaagaggaagaTGATGTGCAGTGTTGCGGTTTAACCCTCAGTGTGgtggtttaaccctcagtgtggtggtttaaccctcagtgttgTGGTGTAACCCTCAGTGTGgtggtttaaccctcagtgttgtggtttaaccctcagtgtggcggtttaaccctcagtgttgtgtttaaccctcagtgtggtggtttaaccctcagtgttgtggtttaaccctcagtgttgtggtttaaccctcagtgtGGCGGTTTAACCCTCG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00013375 True 544 lncRNA 0.48 2 20646 23175

Neighbor

gene id symbol gene type direction distance location
XLOC_005652 NA coding upstream 67 18808 ~ 20579 (+)
XLOC_005651 ppp4r3b coding upstream 5293 9100 ~ 15353 (+)
XLOC_005654 dnaaf2 coding downstream 88037 111212 ~ 113841 (+)
XLOC_005655 ewsr1b coding downstream 136329 159504 ~ 178764 (+)
XLOC_005656 NA coding downstream 179585 202760 ~ 209732 (+)
XLOC_005657 zgc:64201 coding downstream 204870 228045 ~ 229022 (+)
XLOC_005658 cfap36 coding downstream 210307 233482 ~ 238375 (+)
XLOC_005659 NA non-coding downstream 218913 242088 ~ 242619 (+)
XLOC_005661 NA non-coding downstream 244867 268042 ~ 269317 (+)
XLOC_005670 CABZ01061569.1 non-coding downstream 415172 438347 ~ 438462 (+)
XLOC_005671 NA non-coding downstream 448373 471548 ~ 704338 (+)

Expression


Co-expression Network