XLOC_005661


Basic Information

Item Value
gene id XLOC_005661
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 268042 ~ 269317 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00013523
GTTCGGCTGCTTCAGGACTCAAACCTCGTGGTTTTACACACTAatagagttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagctcatGTCTGCTGTGAGGTTCAGCTCTCTCTTCAACACAGCGTTACTCTGAGCCGAGCCGCACGCTCTACACACGCCAGTATTTCTGCACACTTTCGTCAACAGAACAAACCCCGACCTGCTGACCCGCGCTGGATGATCAGAGTAGACGAGCTctaataatgacagaattataACTTTGATTCAAGGTTTACTAATTAATTAGAGCCACTCATCAGGTAGAAGCTCAGATCACTCTAGTGCAGGgggtccaaactcagtcctggagggccggtgaagCTCAGTGCAGGGGATTTATctcatggacacacacacacacacacacacacacacacacacacacacacacacacacactccagcgcttgtttttgtaaataaGCACAGAGAGTCTGGACCTGAGTTCAGCATGTGGTCTGACAGATGGGCTTCAGTGTAGAGTCTCCATTAGGACacacagcgccccctgctgcctCTATAACACCACTGCACAACACAGCCTAGTGTCACTGAtgctctccacacacacacacacacacgcacgctatAGATGTGGATATGGTGGGAATCGAGAGTGAGTTTGTGTTTGCAGGATTTGATGCATTCTTGAACACATCTGTCAGCTCACGCATTACCTGAGAGATGAACACAGGGGACTAGCCGTGGGGTTTCTAGTCTTTGGTGTCACTGTCCTTCCATCAGCGTTTCTACCCTTGGTGTACTAGTCTTGATGTTTCTGGCCTTGGTGTTACTGACTTTGGTGCTTCTAGCCTTGGTGTGACTAGCTTTGGTGTTACTGTCCTTGGTGTCACCAGTTTTGGTGTAACTGGCCTTGGTGTTTCTAGCTATGGTGTTTCTAGCCCTGGTGTCACTGTCCTTGGTGCTTCTATCCTTGGTGTTACTAGCATTGGCGTTTCTACCCTTGGCCTTACTGACCTTGGTGTCACTATCCTTGGTGTCACTGGCTTTAGTGTTACTGTCCTTGGTGCTTCTAGGCTTGGGGTTACTGGTCTTGGTGTCACTAGCCTTGCAGTTATAGCT

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00013523 True 1126 lncRNA 0.49 2 268042 269317

Neighbor

gene id symbol gene type direction distance location
XLOC_005660 foxg1d coding upstream 10221 255067 ~ 257821 (+)
XLOC_005659 NA coding upstream 25423 242088 ~ 242619 (+)
XLOC_005658 cfap36 coding upstream 29667 233482 ~ 238375 (+)
XLOC_005657 zgc:64201 coding upstream 39020 228045 ~ 229022 (+)
XLOC_005656 NA coding upstream 58310 202760 ~ 209732 (+)
XLOC_005662 mpc1 coding downstream 11897 281214 ~ 285151 (+)
XLOC_005663 irf1a coding downstream 42063 311380 ~ 318827 (+)
XLOC_005664 CU633838.1 coding downstream 61238 330555 ~ 363254 (+)
XLOC_005665 FO904836.1 coding downstream 133786 403103 ~ 404113 (+)
XLOC_005666 CU570800.4 coding downstream 137318 406635 ~ 407645 (+)
XLOC_005653 NA non-coding upstream 244867 20646 ~ 23175 (+)
XLOC_005652 NA non-coding upstream 247463 18808 ~ 20579 (+)
XLOC_005670 CABZ01061569.1 non-coding downstream 169030 438347 ~ 438462 (+)
XLOC_005671 NA non-coding downstream 202231 471548 ~ 704338 (+)
XLOC_005675 NA non-coding downstream 284274 553591 ~ 560985 (+)
XLOC_005685 NA non-coding downstream 589740 859057 ~ 861896 (+)
XLOC_005687 NA non-coding downstream 703692 973009 ~ 986263 (+)

Expression


Co-expression Network