AMCG00002918


Basic Information

Item Value
gene id AMCG00002918
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 6228187 ~ 6234155 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002918
ATGAACGATATCATGACAGGAGCCGCCTCCAGCACGAACAGAGGGAGCATTTTGGTCGGCCAGCAGGAGAAAGCGTGTCTGCGCAGTGTGAGAGaaatgTCCCGAGTGTTGATTGTCGGTGCAGGGCTCACGGGTAGTTTGTGTGCTTATCTTCTGCGAAGGGAAATGGTCAATAAAGTAAAGATTGTGGTCTGGGATAAAGCGAAGGGAGCAGGAGGAAGAATGTCAACAAGCAGAAGCCCTGGAGATGCCACATGCACTGTTGACTTGGGGGCTCAGTACATAACTGCAACGCCATACTATGCTCAGAAGCATCAAAGCTTCTATGAAGAGCTGTCgaagcattgcattttaaagccGCTCACTGCCCCAGTGGAAGGGATGATGATCAAAGACGAAGGGATATGCAACTATGTGACCCCGCTGGGAGTCTCATCTATTGTCAAGCATTACCTCCGAGAGTCAGGAGCCGAGGTGTTCTTCGGCCGCCACGTAACCAAGATTGTTCAGGAGGGGGACCGGTGGGAGGTGAGCCAGGCAGCCGGGCCCGTGGAGCAGTTTGACTCCGTAATCCTCACTGTGCCGGTGCCGCAGATCCTACAAATGCAGGGCGATGTCAGCTCGTGTGAGTACGCCTCCCGCACACCGCGCCGGACACATGGGCCG

Function

GO: NA

KEGG:

id description
K18208 RNLS; renalase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002918 True 666 mRNA 0.54 5 6228187 6234155

Neighbor

gene id symbol gene type direction distance location
AMCG00002917 NA coding upstream 15616 6209728 ~ 6212571 (+)
AMCG00002916 acta2,LOC106531354,LOC107683715 coding upstream 34687 6189364 ~ 6193500 (+)
AMCG00002909 NA coding upstream 69620 6157773 ~ 6158567 (+)
AMCG00002910 NA coding upstream 95968 6117729 ~ 6132219 (+)
AMCG00002908 LOC107553481,LOC107753437,LOC107669213,LOC107683711,LOC108413682,LOC107715956,LOC105902286 coding upstream 117675 6094105 ~ 6110512 (+)
AMCG00002915 NA coding downstream 21015 6255170 ~ 6266600 (+)
AMCG00002921 atad1,atad1b,LOC106589392,LOC107680273 coding downstream 85981 6320136 ~ 6329764 (+)
AMCG00002925 NA coding downstream 163302 6397457 ~ 6409095 (+)
AMCG00002926 NA coding downstream 176271 6410426 ~ 6419383 (+)
AMCG00002928 LOC106589397 coding downstream 220717 6454872 ~ 6455141 (+)
G139507 NA non-coding upstream 25128 6202844 ~ 6203059 (+)
G139506 stambpl1,LOC107594159,LOC107758441,LOC107683716 non-coding upstream 26717 6201203 ~ 6201470 (+)
G139505 NA non-coding upstream 28331 6199359 ~ 6199856 (+)
G139504 NA non-coding upstream 29685 6198270 ~ 6198502 (+)
G139498 NA non-coding upstream 31157 6194611 ~ 6197030 (+)
G139531 NA non-coding downstream 63579 6297734 ~ 6311270 (+)
G139573 NA non-coding downstream 184283 6418438 ~ 6418798 (+)
G139572 a1cf,LOC107708930,LOC107695528,LOC107654048,LOC107739758 non-coding downstream 186011 6420166 ~ 6423168 (+)
G139633 NA non-coding downstream 828368 7062523 ~ 7066374 (+)
G139656 NA non-coding downstream 918382 7152537 ~ 7152739 (+)
G139492 NA other upstream 75067 6147748 ~ 6153120 (+)
G139176 NA other upstream 1129443 5096731 ~ 5098744 (+)
G138941 NA other upstream 2198263 4029524 ~ 4029924 (+)
G138888 grid1,LOC106607602 other upstream 2632079 3428689 ~ 3596108 (+)
G138790 bub3,LOC106575478,LOC106577429,LOC107684575 other upstream 3112106 3107458 ~ 3116081 (+)
AMCG00002939 ube2d1,ube2d1b,LOC105891213,LOC106607701,LOC103397267,LOC103397347,LOC105010549,LOC107717106,LOC107553913,LOC107733527 other downstream 832700 7066855 ~ 7073538 (+)
G139720 LOC103376252,LOC104927182,LOC102078543,LOC101474510 other downstream 1142532 7376687 ~ 7379487 (+)
AMCG00002960 NA other downstream 1675097 7909252 ~ 7920908 (+)
G139784 NA other downstream 1689027 7923182 ~ 7926832 (+)
AMCG00002965 eif4ebp2,LOC107564345,LOC107668794,LOC107716353 other downstream 1803422 8037577 ~ 8044413 (+)

Expression


Co-expression Network