G138941


Basic Information

Item Value
gene id G138941
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 4029524 ~ 4029924 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU174764
GGGAAGCAGTGCTGCAGTGCCACACCGGGTCCCTGGCCACCAGAGGGCAGTGCGGCTTGTCTTGTTTCGATGTTGCACAGATATCTCAGTCCCACCTGCACCAGCCCAACACTAAGCAAGCAGATTCCTCACTCCCTCCCCGGCATGCCCCACGTCCACTCTGTCCTTTCAGACCCACCTCTGAGGCAAAGGACTCCTCCGTCTCCGGCTGACGGGCCGCTGCTTCTGCCGGCTGTGGgggagctgagagagagggcaggggcCGTGCAGGAGGGTTTATGTCTGGAGTCGCAGTTACCGCTGTCGTTGTGGATCGTATCTGTTGTTGGTGCTTCCCCCGGGCAATGCTGTGGCGTCGGCAGAGCGGGGCAGGCTGTGCTGCGTCTGTGTGTGACTCTGTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU174764 True 401 TUCP 0.62 1 4029524 4029924

Neighbor

gene id symbol gene type direction distance location
AMCG00002833 NA coding upstream 7130 4016680 ~ 4022394 (+)
AMCG00002834 NA coding upstream 23051 4000290 ~ 4006473 (+)
AMCG00002827 NA coding upstream 55205 3971112 ~ 3974319 (+)
AMCG00002826 NA coding upstream 318207 3711012 ~ 3711317 (+)
AMCG00002825 grid1b,grid1 coding upstream 321846 3699569 ~ 3707678 (+)
AMCG00002835 LOC108269590,LOC107750875,LOC107583634,LOC107668614 coding downstream 1444 4031368 ~ 4033632 (+)
AMCG00002839 NA coding downstream 7786 4037710 ~ 4041401 (+)
AMCG00002831 NA coding downstream 13669 4043593 ~ 4052584 (+)
AMCG00002832 NA coding downstream 26515 4056439 ~ 4071275 (+)
AMCG00002840 inpp5a,LOC106605012 coding downstream 132602 4162526 ~ 4186873 (+)
G138940 NA non-coding upstream 4779 4024442 ~ 4024745 (+)
G138927 NA non-coding upstream 39176 3989924 ~ 3990348 (+)
G138905 NA non-coding upstream 100870 3925169 ~ 3928654 (+)
G138903 NA non-coding upstream 301793 3727497 ~ 3727731 (+)
G138871 NA non-coding upstream 651497 3376246 ~ 3378027 (+)
G138946 NA non-coding downstream 42357 4072281 ~ 4076788 (+)
G139038 NA non-coding downstream 553941 4583865 ~ 4584167 (+)
G139044 NA non-coding downstream 596733 4626657 ~ 4712825 (+)
G139084 cpeb3 non-coding downstream 768689 4798613 ~ 4802244 (+)
G139170 NA non-coding downstream 1037548 5067472 ~ 5068895 (+)
G138888 grid1,LOC106607602 other upstream 433416 3428689 ~ 3596108 (+)
G138790 bub3,LOC106575478,LOC106577429,LOC107684575 other upstream 913443 3107458 ~ 3116081 (+)
AMCG00002784 NA other upstream 1534930 2492086 ~ 2494594 (+)
AMCG00002762 NA other upstream 2619436 1406611 ~ 1410088 (+)
G138506 NA other upstream 2627095 1401289 ~ 1402429 (+)
G139176 NA other downstream 1066807 5096731 ~ 5098744 (+)
G139492 NA other downstream 2117824 6147748 ~ 6153120 (+)
AMCG00002939 ube2d1,ube2d1b,LOC105891213,LOC106607701,LOC103397267,LOC103397347,LOC105010549,LOC107717106,LOC107553913,LOC107733527 other downstream 3036931 7066855 ~ 7073538 (+)
G139720 LOC103376252,LOC104927182,LOC102078543,LOC101474510 other downstream 3346763 7376687 ~ 7379487 (+)
AMCG00002960 NA other downstream 3879328 7909252 ~ 7920908 (+)

Expression


Co-expression Network