G138903


Basic Information

Item Value
gene id G138903
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 3727497 ~ 3727731 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU174711
taagaacataagacagtgtccaatcgagaggagcccattcgccccatcgtgctcgtttggtgtccattaataactaagtgatcaaggatcctatccagtctgtttttgaatgttcccaaattgtctcttcagccacatcgctggggagtttgttcagattgtgacgcctctctgtgtgaagaagtgtctcctgttttctgtcttgaatgccttgaagcccaatttccatttgtgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU174711 True 235 lncRNA 0.45 1 3727497 3727731

Neighbor

gene id symbol gene type direction distance location
AMCG00002826 NA coding upstream 16180 3711012 ~ 3711317 (+)
AMCG00002825 grid1b,grid1 coding upstream 19819 3699569 ~ 3707678 (+)
AMCG00002823 LOC105909129 coding upstream 46205 3677642 ~ 3681292 (+)
AMCG00002822 grid1b,grid1,LOC102791605,LOC107598047,LOC107563625 coding upstream 165348 3561352 ~ 3562149 (+)
AMCG00002821 NA coding upstream 291905 3435143 ~ 3435592 (+)
AMCG00002827 NA coding downstream 243381 3971112 ~ 3974319 (+)
AMCG00002834 NA coding downstream 272559 4000290 ~ 4006473 (+)
AMCG00002833 NA coding downstream 288949 4016680 ~ 4022394 (+)
AMCG00002835 LOC108269590,LOC107750875,LOC107583634,LOC107668614 coding downstream 303637 4031368 ~ 4033632 (+)
AMCG00002839 NA coding downstream 309979 4037710 ~ 4041401 (+)
G138871 NA non-coding upstream 349470 3376246 ~ 3378027 (+)
G138816 NA non-coding upstream 549887 3172907 ~ 3177610 (+)
G138719 NA non-coding upstream 1035657 2691429 ~ 2691840 (+)
G138712 NA non-coding upstream 1059959 2665458 ~ 2667538 (+)
G138634 NA non-coding upstream 1263861 2461638 ~ 2463636 (+)
G138905 NA non-coding downstream 197438 3925169 ~ 3928654 (+)
G138927 NA non-coding downstream 262193 3989924 ~ 3990348 (+)
G138940 NA non-coding downstream 296711 4024442 ~ 4024745 (+)
G138946 NA non-coding downstream 344550 4072281 ~ 4076788 (+)
G139038 NA non-coding downstream 856134 4583865 ~ 4584167 (+)
G138888 grid1,LOC106607602 other upstream 131389 3428689 ~ 3596108 (+)
G138790 bub3,LOC106575478,LOC106577429,LOC107684575 other upstream 611416 3107458 ~ 3116081 (+)
AMCG00002784 NA other upstream 1232903 2492086 ~ 2494594 (+)
AMCG00002762 NA other upstream 2317409 1406611 ~ 1410088 (+)
G138506 NA other upstream 2325068 1401289 ~ 1402429 (+)
G138941 NA other downstream 301793 4029524 ~ 4029924 (+)
G139176 NA other downstream 1369000 5096731 ~ 5098744 (+)
G139492 NA other downstream 2420017 6147748 ~ 6153120 (+)
AMCG00002939 ube2d1,ube2d1b,LOC105891213,LOC106607701,LOC103397267,LOC103397347,LOC105010549,LOC107717106,LOC107553913,LOC107733527 other downstream 3339124 7066855 ~ 7073538 (+)
G139720 LOC103376252,LOC104927182,LOC102078543,LOC101474510 other downstream 3648956 7376687 ~ 7379487 (+)

Expression


Co-expression Network