XLOC_005991 (gsto1)


Basic Information

Item Value
gene id XLOC_005991
gene name gsto1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 25380432 ~ 25389051 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00011833
TAGATCATAAGACATGCCCTCTATGGCTATAAATCACCAATAAATACACCAACTTCCCTTTCATCTTCGAAATTTGTGGCACAGTCATTGATTTAGACAGTTCTTTTGGTTTCTCTGAATAAAATAATGGCTGCATCTCAGAAATGTCTTGGGAAAGGAAGTCCTGCTCCTGGTCCAGTGCCAAAGGACCATATTCGGCTCTACAGCATGAGATTCTGCCCGTTTGCCCAAAGAACCAGATTGGTGCTCAATGCCAAGGGAATAAAATACGACACCATCAACATCAATTTGAAGAACAAACCTGACTGGTTTCTGGAGAAGAATCCCCTTGGTTTAGTGCCAGTGCTGGAGACTCAGAGTGGTCAGGTGATCTACGAATCTCCAATCACCTGTGAGTACCTGGACGAGGTCTATCCTGAGAAGAAGCTGCTCCCGTTTGACCCGTTTGAGAGGGCGCAACAGAGAATGCTGCTGGAGCTTTTCTCAAAGGTGACTCCCTACTTCTATAAGATCCCCGTGAATAGGACGAAAGGAGAGGATGTGTCTGCACTTGAAACAGAACTTAAAGACAAACTCTCTCAGTTCAATGAGATCCTCCTCAAGAAGAAGAGCAAGTTTTTTGGAGGGGATTCAATAACAATGATTGACTACATGATGTGGCCATGGTTTGAGAGGCTGGAGACGATGAATCTGAAGCACTGCTTGGACGGCACACCTGAGCTGAAGAAGTGGACCGAGCGCATGATGGAGGATCCCACTGTTAAAGCTACGATGTTTAGCACAGAAACCTACATGGTCTTCTACAAGTCCTACATGGAGGGAAGCCCAAATTATGATTAcggtttataaataaataaatcttgtcTGGTAAATGATGCCTTTATTGTCTGTTAAGCTGTTTAAACAGATGTTTGCCATGAAATACATTCTTTTATAATCTGATCACAATTAATCTGAAAAGAGAATTTCTTAACTGTTTATTCATCCTTCATGTGACAGGTTTTTGGTGGTGTGTAAATCTACACTTTATTCTTAAAAAGCAGATGTGAATCTAGTAAGTTCAGTTCAAAATCTGAACTGaactttattctttaaataacaTTGATTCACCTATGTCTATTACACTTTGACATGATTAAAGAGTGGACAGCATTCAGATTCAGCTTTTGACACAGACAGAGCAGTTGTTGTGTTGATCTTTATTTCTGTGGTACTAAAGGTTTATGGGTTTACATATCTATGGTTGTGTTCCTAacagtaaatctttttttttatgttacttgaAATAAAGATTGTATTGTTTACGACGTTTTGGCAATTGCTCACAACGTGTGATTGAACTGTATTTGTCTTTGAAtcattcagatgtttttgttaaacacctttatttttctatttctaggAATAAAGCAAATGAAGTCTGTATGAGTGAATCATTTAACAATTTATTCAAGATGATCATTAAAAAAAGCACTCATTCATCAAA

Function

symbol description
gsto1 Predicted to enable glutathione dehydrogenase (ascorbate) activity. Predicted to act upstream of or within glutathione metabolic process. Predicted to be located in cytoplasm. Is expressed in brain; gill; liver; and pleuroperitoneal region. Human ortholog(s) of this gene implicated in Alzheimer's disease and Parkinson's disease. Orthologous to human GSTO1 (glutathione S-transferase omega 1).

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0005737 cytoplasm cellular_component
GO:0045174 glutathione dehydrogenase (ascorbate) activity molecular_function
GO:0004364 glutathione transferase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-040718-365 Predicted to enable glutathione dehydrogenase (ascorbate) activity. Predicted to act upstream of or within glutathione metabolic process. Predicted to be located in cytoplasm. Is expressed in brain; gill; liver; and pleuroperitoneal region. Human ortholog(s) of this gene implicated in Alzheimer's disease and Parkinson's disease. Orthologous to human GSTO1 (glutathione S-transferase omega 1).

Ensembl:

ensembl_id ENSDARG00000022183

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00011833 True 1486 mRNA 0.38 7 25380432 25389051

Neighbor

gene id symbol gene type direction distance location
XLOC_005990 chuk coding upstream 612 25286538 ~ 25379820 (+)
XLOC_005989 ap3m1 coding upstream 171349 25199849 ~ 25209083 (+)
XLOC_005988 si:dkey-24f15.2 coding upstream 525770 24851102 ~ 24854662 (+)
XLOC_005987 dusp13a coding upstream 529620 24842857 ~ 24850812 (+)
XLOC_005986 zgc:153981 coding upstream 542455 24834199 ~ 24837977 (+)
XLOC_005992 gsto2 coding downstream 7845 25396896 ~ 25402772 (+)
XLOC_005993 calhm3 coding downstream 21543 25410594 ~ 25411902 (+)
XLOC_005994 calhm1 coding downstream 23256 25412307 ~ 25417915 (+)
XLOC_005995 calhm2.2 coding downstream 29510 25418561 ~ 25426955 (+)
XLOC_005996 si:dkey-51a16.9 coding downstream 39626 25428677 ~ 25438298 (+)
XLOC_005984 AL929005.1 non-coding upstream 551563 24828753 ~ 24828869 (+)
XLOC_005978 NA non-coding upstream 730493 24597665 ~ 24649939 (+)
XLOC_005975 NA non-coding upstream 807504 24570620 ~ 24572928 (+)
XLOC_005962 CR352246.1 non-coding upstream 1559132 23821186 ~ 23821300 (+)
XLOC_005959 NA non-coding upstream 1969922 23388493 ~ 23410510 (+)
XLOC_005997 BX530079.1 non-coding downstream 54933 25443984 ~ 25444523 (+)
XLOC_006005 NA non-coding downstream 380948 25769999 ~ 25782811 (+)
XLOC_006007 NA non-coding downstream 555228 25944279 ~ 25961369 (+)
XLOC_006008 NA non-coding downstream 576676 25965727 ~ 25983365 (+)
XLOC_006009 NA non-coding downstream 667406 26056457 ~ 26065264 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000012_12138610_12140673 GSTO1 coding CI01000012 null 12138604 ~ 12141165 (-)