G137016


Basic Information

Item Value
gene id G137016
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 18932424 ~ 18933248 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU172242
CGTCACCCCGTACTTCAGCGCTATTCCCTGGAGCGTCTCGCCGGGCTGGACCTGGTGCTCCACCCGCCTCTCTCGCACCGGGGACCGGGTTGACCGGGTCAGGCTGCCGTAGGAGCGGGTCCGGGTCCCGGAGAGGAGACCCCCGCCCCCGGCCGGAGAGGGAGAAGCCATGGCTTCAGACGACTCCCTTTTATCCCTGCTTATATGCTCTTCTCTATCCGCAAGACAGCACAGTACTGGTCGCCTTAATTATGTGCAATATTAGAGCTGCGTGACATGCGGGCTGTCGTGAGGGAAAACCGcactaaaacaatgtaaataaaaaaactcctCCAGGCACCCGTACTCCAGCTTTAGGGTACAGGGGTCGCTTTACATTGTGCCGATTGACCTGGGAAAAGTAGCACTTATTGTTGGCAAAAGCATGTCTGTCCCCCGGTCGTCGCACAGCTGGGTGTCGAGGGTCTGCGATGGGTTGATTTCGATATTTTATCCCACAGTCCCAAGTTGTTCACAATTACCATGTTTTCCCGAGGGTGGGGTGAGGCTGAAAGTAAAACGTCCCCAGCGATGTAAAGACAATTGTTGCCAGTTTTCCGATTACCTGCAGATGCTTTCAAAGATGTCCACGACGCCCGCAGTTATTTCACCTTGACTCCTTCAACACGACTTTATTGTTGAAAGCCATATCCGACGAcggcatttttatttattgtttcggtctattttttttaatgcaattccATAAACGAAAGCAATCCAAATAGTTTCTCAAAACATGGCTATGCGCTGCACAGAAAGCGCCCCTGAGCAGGTGCACCCTGG

Function

GO:

id name namespace
GO:0050780 dopamine receptor binding molecular_function
GO:0001664 G protein-coupled receptor binding molecular_function
GO:0031752 D5 dopamine receptor binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU172242 True 825 lncRNA 0.52 1 18932424 18933248

Neighbor

gene id symbol gene type direction distance location
AMCG00012464 tnfaip8l2,LOC106605333,LOC105031250,LOC106580940,LOC107587822 coding upstream 7375 18915218 ~ 18925049 (+)
AMCG00012466 LOC107741773,LOC108262134,LOC106580947,LOC108441933,LOC106605334 coding upstream 23690 18896414 ~ 18908734 (+)
AMCG00012458 NA coding upstream 379610 18545578 ~ 18552814 (+)
AMCG00012456 NA coding upstream 419818 18493584 ~ 18512606 (+)
AMCG00012457 NA coding upstream 440953 18476711 ~ 18491471 (+)
AMCG00012465 LOC107732464 coding downstream 336 18933584 ~ 18937478 (+)
AMCG00012470 NA coding downstream 121392 19054640 ~ 19065913 (+)
AMCG00012474 onecut1,LOC107746960 coding downstream 167071 19100319 ~ 19109503 (+)
AMCG00012476 NA coding downstream 338062 19271310 ~ 19273160 (+)
AMCG00012479 NA coding downstream 344468 19277716 ~ 19294096 (+)
G137007 NA non-coding upstream 29553 18902512 ~ 18902871 (+)
G136969 NA non-coding upstream 278826 18615898 ~ 18653598 (+)
G136873 NA non-coding upstream 457508 18473233 ~ 18474916 (+)
G136866 NA non-coding upstream 461640 18433570 ~ 18470784 (+)
G136848 NA non-coding upstream 615348 18295215 ~ 18317076 (+)
G137031 NA non-coding downstream 31286 18964534 ~ 18972066 (+)
G137027 NA non-coding downstream 86910 19020158 ~ 19026005 (+)
G137074 NA non-coding downstream 179522 19112770 ~ 19114862 (+)
G137079 NA non-coding downstream 192593 19125841 ~ 19126313 (+)
G137080 NA non-coding downstream 205877 19139125 ~ 19161143 (+)
AMCG00012460 NA other upstream 387934 18539545 ~ 18544490 (+)
G136864 psmb4 other upstream 544118 18385289 ~ 18388306 (+)
AMCG00012439 NA other upstream 798043 18130284 ~ 18134381 (+)
G136720 cct3,tcpg,LOC107597996,LOC107587818,LOC107741740,LOC107671634,LOC107704884 other upstream 1028614 17902832 ~ 17903810 (+)
G136658 NA other upstream 1088503 17840933 ~ 17843921 (+)
AMCG00012471 NA other downstream 114249 19047497 ~ 19053829 (+)
G137083 NA other downstream 236500 19169748 ~ 19174421 (+)
G137111 ctsk,LOC107689854,LOC107587836,LOC107741754,LOC108441922 other downstream 304441 19237689 ~ 19238958 (+)
AMCG00012480 NA other downstream 399080 19332328 ~ 19350202 (+)
G137252 NA other downstream 881677 19814925 ~ 19815617 (+)

Expression


Co-expression Network