AMCG00018261


Basic Information

Item Value
gene id AMCG00018261
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 5748069 ~ 5750422 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018261
atggttttatttgctCGAATTGTGCATCTGCTCAAGGCGGACAGGGCTCTGGTTTGTACACCGATCAGATGTGTCTCTGAGCATATTCACACTTCGGACAAAATGCATGCGTCAAGTTCTTCAAGCAAAAGGTTGCGAGTTCTGGTCGACATGGACGGGGTCATAGCGGATTTCGAAGGAGGATTTTTGAAGAAATTCCAGGCCAGATATCCGAAGGAGCCGTGCATTAGTTTGGAGGATCGCAGAGGATTTTGGGTGTCGACCCAGTATGGACAACTCAGGAGTGATCTTTGCGAGAAGGCCATCAGCGTATGGGAATCGCAAAACTTCTTCATAGACCTGGAGCCACTGCCTGGTGCTGTGGAAGCAGTGAAGGAGATGTCTAAGCTTAAAAAtccaataaagaaatacaactaCTGTCCTTACGAAAAGTATGCCTGGGTAGAAAAGCATTTTGGCCACGAGTTTTTGGAGCAGATCATACTGACCAGAGACAAGACGGTGGTGTCTGCGGACCTTCTCATCGATGACAAGCCAGACATCACGGGGGCTGAACCCAATCCCTCCTGGGAGCATATCCTTTTCACCGCCTGCCACAACAAACACCTGCCGCCCAGCTCGTGCCTCCGGAGACTCCAGTCCTGGTCGTGTGATTGGAAGGCCCTTCTGGACAGCAAGAGGCCATGA

Function

GO: NA

KEGG:

id description
K01081 E3.1.3.5; 5'-nucleotidase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018261 True 687 mRNA 0.50 5 5748069 5750422

Neighbor

gene id symbol gene type direction distance location
AMCG00018259 NA coding upstream 9245 5688305 ~ 5738824 (+)
AMCG00018256 LOC101067528 coding upstream 114281 5623045 ~ 5633788 (+)
AMCG00018257 LOC108274018,LOC108413479,LOC107602438,LOC108437874,LOC107719913 coding upstream 143920 5591847 ~ 5604149 (+)
AMCG00018255 LOC106933195,LOC107091042,LOC103143274,LOC106958689,LOC108237146,LOC107388092,LOC103481993 coding upstream 219497 5527286 ~ 5528572 (+)
AMCG00018254 LOC108274084,LOC107090247 coding upstream 355587 5381051 ~ 5392482 (+)
AMCG00018260 med9 coding downstream 27354 5777776 ~ 5777991 (+)
AMCG00018266 NA coding downstream 139752 5890174 ~ 5904487 (+)
AMCG00018267 NA coding downstream 184617 5935039 ~ 5948592 (+)
AMCG00018268 NA coding downstream 201847 5952269 ~ 5963749 (+)
AMCG00018271 NA coding downstream 221392 5971814 ~ 6015227 (+)
G115201 NA non-coding upstream 403122 5344487 ~ 5344947 (+)
G115188 NA non-coding upstream 430144 5316453 ~ 5317925 (+)
G115099 NA non-coding upstream 647131 5095148 ~ 5100938 (+)
G115061 NA non-coding upstream 933650 4814018 ~ 4814419 (+)
G114985 NA non-coding upstream 1154224 4593460 ~ 4593845 (+)
G115331 LOC100136012 non-coding downstream 295608 6046030 ~ 6046534 (+)
G115379 c2h16orf72,LOC105900007,LOC107685917,LOC107590581 non-coding downstream 775297 6525719 ~ 6588409 (+)
G115419 NA non-coding downstream 867756 6618178 ~ 6620097 (+)
G115439 NA non-coding downstream 903700 6654122 ~ 6678353 (+)
G115441 arhgdib,LOC106606251,LOC107685923,LOC107590585 non-coding downstream 908111 6658533 ~ 6667223 (+)
G115049 NA other upstream 984164 4761518 ~ 4763905 (+)
AMCG00018216 telo2 other upstream 1143964 4594933 ~ 4604105 (+)
AMCG00018196 NA other upstream 1554739 4186410 ~ 4193330 (+)
G114551 NA other upstream 3100295 2640846 ~ 2647774 (+)
G114518 NA other upstream 3179131 2491313 ~ 2568938 (+)
G115299 NA other downstream 199041 5949463 ~ 5951017 (+)
AMCG00018272 NA other downstream 405066 6155488 ~ 6160616 (+)
AMCG00018280 NA other downstream 960060 6710482 ~ 6747438 (+)
G115590 fbxl16,LOC107685932,LOC107568165,LOC107738613,LOC107568127,LOC107690242 other downstream 2143205 7893627 ~ 7894449 (+)
G115648 NA other downstream 2369356 8119778 ~ 8122171 (+)

Expression


Co-expression Network