AMCG00018266


Basic Information

Item Value
gene id AMCG00018266
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 5890174 ~ 5904487 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018266
ATGCACCTTTCTGTCACAGTTGTAGCTTTCATCGTTGCCCTCaaccaaaataaacagttaATCGGGGAAAGGGGACTGATGCCCTGCAAGCAGTACTTAAGAGAAGTCAAGCGGTATGTCGGGGGGAAGATCAACATGGACGCCTTGAGTTACGCCCCCACTGTCTTGTGGTTCCTGGACTGGTCGGACATGGACACCAACCTGGACAATATCGCCTTGATAGGACTGGGCCTCTCGACCTTCGTCCTGCTGACAGGAATTGCCAACATGATAGTCATGGCCCTGCTGTGGATTCTCTATCACTCTCTGGTCAATGTTGGGCAACTCTGCCAAAGAGTGGGTTGCTTATACTTCGTCAAGGGAACTGTTAATCCTGAAGAGTACATCCAGATCCTAAAGGTGAAAGgTATTCTTTTGTTTCTCAATGTCTTCTCTGTGATCGTTGTTTTGAGGAAGATGTGA

Function

GO:

id name namespace
GO:0005657 replication fork cellular_component
GO:0004164 diphthine synthase activity molecular_function

KEGG:

id description
ko03008 Ribosome biogenesis in eukaryotes

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018266 True 462 mRNA 0.48 5 5890174 5904487

Neighbor

gene id symbol gene type direction distance location
AMCG00018260 med9 coding upstream 112183 5777776 ~ 5777991 (+)
AMCG00018261 NA coding upstream 139752 5748069 ~ 5750422 (+)
AMCG00018259 NA coding upstream 151350 5688305 ~ 5738824 (+)
AMCG00018256 LOC101067528 coding upstream 256386 5623045 ~ 5633788 (+)
AMCG00018257 LOC108274018,LOC108413479,LOC107602438,LOC108437874,LOC107719913 coding upstream 286025 5591847 ~ 5604149 (+)
AMCG00018267 NA coding downstream 30552 5935039 ~ 5948592 (+)
AMCG00018268 NA coding downstream 47782 5952269 ~ 5963749 (+)
AMCG00018271 NA coding downstream 67327 5971814 ~ 6015227 (+)
AMCG00018270 LOC100707100,LOC102798624,LOC101484267,LOC106579017,LOC107726261 coding downstream 131593 6036080 ~ 6040179 (+)
AMCG00018269 NA coding downstream 156474 6060961 ~ 6061581 (+)
G115201 NA non-coding upstream 545227 5344487 ~ 5344947 (+)
G115188 NA non-coding upstream 572249 5316453 ~ 5317925 (+)
G115099 NA non-coding upstream 789236 5095148 ~ 5100938 (+)
G115061 NA non-coding upstream 1075755 4814018 ~ 4814419 (+)
G114985 NA non-coding upstream 1296329 4593460 ~ 4593845 (+)
G115331 LOC100136012 non-coding downstream 141543 6046030 ~ 6046534 (+)
G115379 c2h16orf72,LOC105900007,LOC107685917,LOC107590581 non-coding downstream 621232 6525719 ~ 6588409 (+)
G115419 NA non-coding downstream 713691 6618178 ~ 6620097 (+)
G115439 NA non-coding downstream 749635 6654122 ~ 6678353 (+)
G115441 arhgdib,LOC106606251,LOC107685923,LOC107590585 non-coding downstream 754046 6658533 ~ 6667223 (+)
G115049 NA other upstream 1126269 4761518 ~ 4763905 (+)
AMCG00018216 telo2 other upstream 1286069 4594933 ~ 4604105 (+)
AMCG00018196 NA other upstream 1696844 4186410 ~ 4193330 (+)
G114551 NA other upstream 3242400 2640846 ~ 2647774 (+)
G114518 NA other upstream 3321236 2491313 ~ 2568938 (+)
G115299 NA other downstream 44976 5949463 ~ 5951017 (+)
AMCG00018272 NA other downstream 251001 6155488 ~ 6160616 (+)
AMCG00018280 NA other downstream 805995 6710482 ~ 6747438 (+)
G115590 fbxl16,LOC107685932,LOC107568165,LOC107738613,LOC107568127,LOC107690242 other downstream 1989140 7893627 ~ 7894449 (+)
G115648 NA other downstream 2215291 8119778 ~ 8122171 (+)

Expression


Co-expression Network