AMCG00018268


Basic Information

Item Value
gene id AMCG00018268
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 5952269 ~ 5963749 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018268
ATGTCCCGGAAGAAGACGGCGCGGCGGAGCGGCACCTGCGGGCCCCCGGACAAGAGCGCGGCGGGGGGCCAGGGCGCGCGCGGGGCGGAGGGGCTCGCGAACGGCGTGGTGATGCTGGTTGGCGACTCTGGAGTTGGAAAGACATGCTTGCTGGTGCGTTTTAAGGATGGTGCTTTTCTGGCTGGGAGCTTCATTTCGACAGTCGGGATTGACTTCAGGtcctACAGGAATGTTTCTGCACTAGTCTGTGACTTGGAGGAAGAAGTGCTGGACAAGCAAGCCATCCAGCAGAGAAATGTCAAGACCATTCTCTGGAAATCGTCATTCTCGAACAGTCAGAGCCGCAAGGAGCGAAAACAGTTGGACTTGCTTGATAACGAACAGCTCAGCTTTTATCAAGAGAAGATAACCGAGTCAGCAAGATTGTGA

Function

GO:

id name namespace
GO:0055008 cardiac muscle tissue morphogenesis biological_process
GO:0060415 muscle tissue morphogenesis biological_process
GO:0048644 muscle organ morphogenesis biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018268 True 429 mRNA 0.56 6 5952269 5963749

Neighbor

gene id symbol gene type direction distance location
AMCG00018267 NA coding upstream 3677 5935039 ~ 5948592 (+)
AMCG00018266 NA coding upstream 47782 5890174 ~ 5904487 (+)
AMCG00018260 med9 coding upstream 174278 5777776 ~ 5777991 (+)
AMCG00018261 NA coding upstream 201847 5748069 ~ 5750422 (+)
AMCG00018259 NA coding upstream 213445 5688305 ~ 5738824 (+)
AMCG00018271 NA coding downstream 8065 5971814 ~ 6015227 (+)
AMCG00018270 LOC100707100,LOC102798624,LOC101484267,LOC106579017,LOC107726261 coding downstream 72331 6036080 ~ 6040179 (+)
AMCG00018269 NA coding downstream 97212 6060961 ~ 6061581 (+)
AMCG00018273 dexi,LOC107690264,LOC107567922,LOC107733843,LOC107590611,LOC107736577,LOC107685935 coding downstream 161751 6125500 ~ 6125769 (+)
AMCG00018275 NA coding downstream 252476 6216225 ~ 6219216 (+)
G115201 NA non-coding upstream 607322 5344487 ~ 5344947 (+)
G115188 NA non-coding upstream 634344 5316453 ~ 5317925 (+)
G115099 NA non-coding upstream 851331 5095148 ~ 5100938 (+)
G115061 NA non-coding upstream 1137850 4814018 ~ 4814419 (+)
G114985 NA non-coding upstream 1358424 4593460 ~ 4593845 (+)
G115331 LOC100136012 non-coding downstream 82281 6046030 ~ 6046534 (+)
G115379 c2h16orf72,LOC105900007,LOC107685917,LOC107590581 non-coding downstream 561970 6525719 ~ 6588409 (+)
G115419 NA non-coding downstream 654429 6618178 ~ 6620097 (+)
G115439 NA non-coding downstream 690373 6654122 ~ 6678353 (+)
G115441 arhgdib,LOC106606251,LOC107685923,LOC107590585 non-coding downstream 694784 6658533 ~ 6667223 (+)
G115299 NA other upstream 1252 5949463 ~ 5951017 (+)
G115049 NA other upstream 1188364 4761518 ~ 4763905 (+)
AMCG00018216 telo2 other upstream 1348164 4594933 ~ 4604105 (+)
AMCG00018196 NA other upstream 1758939 4186410 ~ 4193330 (+)
G114551 NA other upstream 3304495 2640846 ~ 2647774 (+)
AMCG00018272 NA other downstream 191739 6155488 ~ 6160616 (+)
AMCG00018280 NA other downstream 746733 6710482 ~ 6747438 (+)
G115590 fbxl16,LOC107685932,LOC107568165,LOC107738613,LOC107568127,LOC107690242 other downstream 1929878 7893627 ~ 7894449 (+)
G115648 NA other downstream 2156029 8119778 ~ 8122171 (+)
G115789 NA other downstream 2729615 8693364 ~ 8694719 (+)

Expression


Co-expression Network