Gene
RNA
| Item | Value |
|---|---|
| gene id | CI01000004_06624281_06625474 |
| gene name | FAM110B |
| gene type | coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000004 |
| NCBI id | null |
| chromosome length | 17451736 |
| location | 6623037 ~ 6626433 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| symbol | description |
|---|---|
| fam110b | Predicted to be located in cytoplasm and microtubule organizing center. Is expressed in brain and epiphysis. Orthologous to human FAM110B (family with sequence similarity 110 member B). |
| id | name | namespace |
|---|---|---|
| GO:0005737 | cytoplasm | cellular_component |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| CI01000004_06624281_06625474.mRNA | True | 3397 | mRNA | 0.48 | 1 | 6623037 | 6626433 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000004_06571261_06572539 | SEP15 | coding | upstream | 50370 | 6570771 ~ 6572667 (+) |
| CI01000004_06503758_06508636 | GTF2B, GTF2B.L, TF2B | coding | upstream | 114094 | 6503445 ~ 6508943 (+) |
| CI01000004_06487045_06494732 | NA | coding | upstream | 127493 | 6487045 ~ 6495544 (+) |
| CI01000004_06466871_06468477 | NA | coding | upstream | 154413 | 6466770 ~ 6468624 (+) |
| CI01000004_06463149_06463918 | NA | coding | upstream | 159031 | 6463149 ~ 6464006 (+) |
| CI01000004_06637295_06650428 | NA | coding | downstream | 10647 | 6637080 ~ 6650825 (+) |
| CI01000004_06651958_06654716 | CYP7A1 | coding | downstream | 25436 | 6651869 ~ 6654928 (+) |
| CI01000004_06833827_06840024 | RAB2A | coding | downstream | 207394 | 6833827 ~ 6840399 (+) |
| CI01000004_06860789_06892941 | CHD7 | coding | downstream | 234356 | 6860789 ~ 6893505 (+) |
| CI01000004_06952094_06953401 | NA | coding | downstream | 325419 | 6951852 ~ 6953549 (+) |
| G28421 | NA | non-coding | upstream | 22663 | 6587882 ~ 6600374 (+) |
| G28440 | NA | non-coding | upstream | 46652 | 6575533 ~ 6576385 (+) |
| G28326 | NA | non-coding | upstream | 165756 | 6456898 ~ 6457281 (+) |
| G28325 | NA | non-coding | upstream | 166188 | 6456624 ~ 6456849 (+) |
| G28309 | NA | non-coding | upstream | 181535 | 6425355 ~ 6441502 (+) |
| G28471 | NA | non-coding | downstream | 11938 | 6638371 ~ 6638680 (+) |
| G28474 | NA | non-coding | downstream | 16652 | 6643085 ~ 6643341 (+) |
| G28476 | NA | non-coding | downstream | 18576 | 6645009 ~ 6645279 (+) |
| G28486 | NA | non-coding | downstream | 47806 | 6674239 ~ 6674474 (+) |
| G28302 | NA | other | upstream | 120950 | 6470028 ~ 6502087 (+) |
| G28165 | NA | other | upstream | 890036 | 5732589 ~ 5733001 (+) |
| G27805 | NA | other | upstream | 1249234 | 5372825 ~ 5373803 (+) |
| CI01000004_03550525_03552621 | PTGER4C | other | upstream | 3070591 | 3550329 ~ 3553423 (+) |
| CI01000004_07654234_07655677 | MRPL34 | other | downstream | 1028339 | 7654234 ~ 7656383 (+) |
| CI01000004_08414451_08436256 | NA | other | downstream | 1807272 | 8414316 ~ 8439933 (+) |
| G28859 | NA | other | downstream | 1972802 | 8599235 ~ 8599603 (+) |
| CI01000004_08976512_08980033 | TTPA | other | downstream | 2350005 | 8976254 ~ 8980984 (+) |
| G30797 | NA | other | downstream | 3870943 | 10497376 ~ 10497788 (+) |
| species | gene id | symbol | gene type | chromosome | NCBI id | location |
|---|
