CI01000004_11944095_11946749


Basic Information

Item Value
gene id CI01000004_11944095_11946749
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 11943785 ~ 11947016 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_11944095_11946749.mRNA
ATACACAGTTCCTGAAATCAAAGTTAGGAAGTTATCATTCAAATGTCCAGTTCATTCCTGCCCTGATTTAAAACACTGTACATTTCTTTCCATTCGCCCTGCACTGCTGATGCTGTGTCTAATCTTGAGAAGGAATGTGACCTTGTTTTTTGTCCTTGGTTTGCGCAGAGGACAGGTCCACTAAGCTCAATTTGGCCTTCCCTTGTCATCTATGGAGCAGATGCACATCAACAAAACTGGCAGGAAATCAGGCAGGCAGAATGACTGATGACCCTTATAGGTCAAATAACAGTTTACCACAGTGATTATGTGGGTATGGAAGTGGAAAACGTACAAGATCTCAATGCCAAACTAATTTCACTAGAAGGAGCACTGAGATTGGCTTCTCAGGAAAGAGCCACGGCTGTTACCCAGTGGCTCAGTCTGACTGAGATTACTACAGACCTGTCAGCTCTATCAGAAAAGGAAGTGCTTTCTGTTGGCGAGATAACTCCAACACAGATCTCTTCTGTCTCACCTATCTCAGTCGCTCATTACTGTTCATATCTGGGTGGGGAGCAGTGTTTTTATCTTCCAACGAAGCACAGGCCATCCGCTGTTCTGTTCTGTCTGTTAGAGACGACACACAAACACACCATGCATGGGCCATACAGCATCATAATACACACAGAGGAAGAGCACGTGACGCAGAGTCTTAATGTGACTAATAGTATATTCTGAGCGCTCGGCTTAAGTCTAAAAGTCAAGGGCAGAAAAACAAAAACAAGTCACACATTAACGTATATAATAAGCCAACATGATCTTTTTTTTTTGTTTGTTTGTTTGTTTTAAATTCCACCACAATATAAATTTCAGGCTTGTGTGATCTGTGCATCAAAATCATCAAATGAAATATGAAATCTCAGCAGGCTGTTTCACAGCAAGAGTAGAGGAGATGTGACAGGGTAACAAACATTGGATGCTGCCTCAGCTTTAGAGAGTTTTATATGCATGTACTGTGTGCATGCACTCAAATGAACTTGCAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_11944095_11946749.mRNA True 1030 mRNA 0.42 3 11943785 11947016

Neighbor

gene id symbol gene type direction distance location
CI01000004_11930044_11933982 NA coding downstream 9629 11929840 ~ 11934156 (-)
CI01000004_11826038_11848540 AMPH coding downstream 95245 11824907 ~ 11848540 (-)
CI01000004_11789063_11823381 NA coding downstream 119045 11788496 ~ 11824740 (-)
CI01000004_11768937_11770193 NA coding downstream 173357 11768641 ~ 11770428 (-)
CI01000004_11731995_11744636 FAM134B coding downstream 199149 11731852 ~ 11744636 (-)
CI01000004_11974708_11980518 NA coding upstream 27628 11974644 ~ 11982295 (-)
CI01000004_12025107_12032154 NA coding upstream 78091 12025107 ~ 12032952 (-)
CI01000004_12048597_12107143 ASAP1, ASAP1A coding upstream 100303 12047319 ~ 12108201 (-)
CI01000004_12111607_12123001 UBTFL, UBF1 coding upstream 163876 12110892 ~ 12123318 (-)
CI01000004_12127993_12144790 SLC4A2A, SLC4A2 coding upstream 179584 12126600 ~ 12144790 (-)
G32195 NA non-coding downstream 36357 11900123 ~ 11907428 (-)
G32174 NA non-coding downstream 50812 11892732 ~ 11892973 (-)
G32163 NA non-coding downstream 99523 11842652 ~ 11844262 (-)
G32154 NA non-coding downstream 160236 11782248 ~ 11783549 (-)
G32150 NA non-coding downstream 166696 11776519 ~ 11780951 (-)
G32222 NA non-coding upstream 647 11947663 ~ 11947956 (-)
G32224 NA non-coding upstream 3975 11950991 ~ 11951304 (-)
G32225 NA non-coding upstream 4555 11951571 ~ 11955287 (-)
G32228 NA non-coding upstream 12343 11959359 ~ 11959798 (-)
G32229 NA non-coding upstream 12899 11959915 ~ 11960172 (-)
CI01000004_11407198_11412220 ADCYAP1B, ADCYAP1 other downstream 530878 11406957 ~ 11412907 (-)
G31203 NA other downstream 1193144 10746437 ~ 10750641 (-)
G30316 NA other downstream 2536864 9377937 ~ 9406921 (-)
G29746 NA other downstream 3585658 8354498 ~ 8358127 (-)
G32207 NA other upstream 429152 12376168 ~ 12384780 (-)
CI01000004_14543631_14551256 NA other upstream 2603784 14541515 ~ 14551352 (-)
G33746 NA other upstream 2621777 14568793 ~ 14569264 (-)
G33750 NA other upstream 2631442 14578458 ~ 14579001 (-)
G33755 NA other upstream 2634390 14581406 ~ 14581873 (-)

Expression


Co-expression Network