CI01000004_12048597_12107143 (ASAP1, ASAP1A)


Basic Information

Item Value
gene id CI01000004_12048597_12107143
gene name ASAP1, ASAP1A
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 12047319 ~ 12108201 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_12048597_12107143.mRNA
AGAATTTGAGACAAACCATTTTATATGCGATAGTTACGTGCTTGTGCTGTATTATAACATCATAATAAACATATGACTGACTGTCATACCATCTATAACTGTATTTAGCTTGACCTTTTATGACTGCTTCTTAAACACTTCTTGCTTTAGTGCCTGAAACCATACATTTTGGATGTGTTCAGTAGATATCAGCATTAGGGCAAAAAATTTGCTGTATAGACTACATTACATTTATAATGTATGAATATAATAATAAGAAATATAACCTAATGCATAAATAAATGACCCAATTTTGGACACTTTTAATTTTGGCACAATTTAGTCCTGAATTTATTTGTTTTTATTAATTTACTAGTTTTATTAAAAATCTACTTTACTACTAATTTATTATTTATTCTTGCGTTTATTGAATTCTTTATTTATTATTATGATTATTTTTAAACTATACGAATTTATCTATTCATTTGATTTATTTATTAATCTTTTATAAAGTAGCAAAAATAAAGCCCTTCTGACGCATGCGCAGTTTCTCCTCTTGTTTATCCCGTCATCAATGGTGGGAGGAGATGAGCGTGCGTGCACGCGCTGGTGTCAGGGAGCTCAGACCGTCAGGACGGGGGGGAAAACGGAGGAAAGAGAAAGGGAAAACAGAATGAAACCGCTTCCGAAACCGGAACAACCATAATTGAAGGAAATATTCAAAATATCATACCTTTTTAAAGCTAAATTGTGGAATGAGGGCATTTTAAACCAGCATCTCAAATCTTACATTGGGAGAACAAGGAGAGCAGCCTGAGCCGTTTAATGTAGATGCAAGTGGATAATTAAGACAGGGGAAGAGGAAAGACGTGGAAATTACACACAACGACCCTCTCTAGGGACGGGAATTGCATAGTCAGTGAAGAAAAAGGCACTGCCACACATTTGGCTACGTTTCTTTTCATTTTACGCATTGCCTTGCCATTCAACCTTACCCAAACTGAGACATCGCTCCGGTCTTATGGTGCTATTGTGATTTTTCTCCCCTCCATTTTTATTGGGCGACTGTGTTTGCAAGGATGCCGGATCAGATCTCCGTGTCCGAGTTTCTCTCGGAGACGACGGAGGATTACAATTCCCCCACGACATCAAGCTTCACCACCCGCTTGCAGAGCTGTCGGAACACGGTCAATGTTCTGGAAGAGGCTTTGGACCAAGACCGAACAGCTTTACAAAAGGTCAAGAAATCTGTCAAAGCAATCTACAACTCGGGTCAAGAGCATGTGCAGAATGAAGAGAATTATGGGCAGGCACTAGACAAGTTTGGCAGCAACTTCATCAGCCGAGATAACTCTGATCTGGGAACAGCCTTCATCAAGTTCTCTGGCCTTATCAAGGAGCTGGCCGCTCTCCTCAAGAACCTGCTCCAGAGTCTCAGTCACAATGTCATCTTCACCCTGGACTCTCTGCTCAAAGGAGATCTGAAGGGAGTGAAGGGGGAACAGATGCTTCATAAACCATTAACAAGCACCTACACCAATGCTCATGATTTAAAAAAGCCTTTCGACAAGGCCTGGAAAGACTATGAGACCAAGTTCACAAAGATTGAGAAGGAGAAGAGGGAACATGCCAAGCAGCACGGCATGATCCGCACGGAGATCACCGGCGCAGAGATCGCAGAAGAGATGGAGAAGGAGCGGAGGATCTTTCAGCTGCAGATGTGTGAGTACCTGATTAAAGTGAACGAGATTAAGACCAAGAAGGGAGTGGATCTCCTCCAGAATCTCATCAAGTATTATCATGCACAGTGCAATTTTTTCCAGGATGGCTTGAAAACCGCTGACAAGTTGAAGCAGTATATCGAGAAATTAGCAGCTGATCTCTATAATATAAAACAGACCCAGGATGAGGAGAAAAAACAGCTTACAGCTCTCAGAGACCTCATCAAGTCGTCCTTACAACTAGACCAGAAAGAGGATTCTCAGAGCAAGCAGAGCGGTTACAGTATGCACCAGCTGCAGGGCAATAAGGAGTTTGGCTGTGAGAAGAAGGGCTATCTCTTCAAGAAGAGTGATGGGATCCGTAAGGTGTGGCAGAGAAGGAAGTGCTCAGTGAAAAATGGCATCCTCACCATCTCCCATGCCACATCCAACAGGCAGCCGGTGAGACTGAATCTGCTGACCTGTCAGGTTAAACCCAGCGGAGAGGATAAGAAGTGCTTTGACCTCATCTCCCATAATCGAACATATCATTTCCAGGCAGAGGATGAACAGGAGTTTGTGATATGGATTTCAGTGCTGACTAACAGTAAGGAGGAGGCTCTGAACATGGCGTTCCGTGGGGAGCAGAGTGCTGGAGATGACAGTTTGGAAGACTTGACCAAAGCCATCATCGAGGATGTGCTGCGCATACCTGGAAACGAAGTGTGCTGTGACTGTGGAGCACCAGAGCCTAAATGGTTATCCACTAACCTCGGCATCCTGACATGCATCGAGTGTTCTGGGATCCACAGGGAAATGGGCGTCCATATTTCACGCATCCAGTCCATGGAACTAGACAAACTCGGCACCTCTGAACTCTTGCTGGCGAAGAATGTGGGTAACAGTAGTTTTAATGAAATATTAGAAGGGAATCTGCCGAGCCCTTCACCAAAACCAACACCATCAAGTGACATGACCGAGAGGAAGGAGTACATAAATGCAAAGTATGTGGAGCACAGGTTTGCTCGGCATACAGCCACTACAGCCACAGCCAGACAGGGCGACTTGTACGAGGCCGTGAGAACTCGAGACCTGATGGCTCTGATTCAGCTCTATGCAGATGGAGTGGAGCTAATGGATCCATTTCCAGAAGCAGGACGGGACCCGGGAGAGACAGCGCTGCACTTTGCTGTGCGGATGTCAGACCAGACCTCACTGCACCTGGTGGACTTTCTTGTCCAAAACAGTGGAACTCTAGACAGACAGACGGAGAGTGGAAACGCTGCTCTCCATTACTGCTGCACATATGAGAAGCCAGAGTGTCTCAAACTGCTGCTCAGGGGAAAACCATCTATTGACCTGGTTAATCAAAATGGGGAGACAGCTTTGGACATTGCCAGACGACTGAAAAATACACCGTGTGAAGAGCTACTGATGGAGGCAGCAGCCGGGAGGTTTAATCCTCACGTGCATGTGGAGTATGAGTGGAATCTGCGGCTGGAGGAGATTGACGAGAGTGATGATGACCTAGATGACAAGCCCAGTCCAGTGAAGAAGGAGCGTTCTCCCCGACCTCAGAGCTTCTGTCATTCCTCGAGCGTGTCCCCTCAGGAGAAGCTGTCTCTGCCGGGGTATTTAGGGCACAGGGACAAACAGAGACTGTCCTACGGAGCCTTTGCCAACCCCGTCTACAGCACCTCCACTGATACACCTGCATCTCCGGTATCAGAGGGACCCACAATAGCCAGCAAGACCACTACAAAAGCTCCGTCCTCTGGACCGCCCACCTCCCTGCCACTGGGATCGCAATCGAGTGCAGGAGGCAGCTCCACTCTGTCTAAGAAGAGAGCGCCTCCTCCACCTCCCGGACACAAGCGCACCCACTCAGACCCCCCCAGCCCCGTACTGCAGGGCCCGCAGAGCAAAGGTTACTGGGACAGAAACAAGCTTTTAATGAAATACAGGAACTTCAAACCTGCTTTAAACCTCTTCCCTCTTTTTATTGTGAACCTCATAGGAATGGCACTACGAAAGATTGACACAATCCACCTCCCCTCAATGGACAAGTCTGGTCCCGATGTGCTGCAGAAACCTCCACAGGCCCAGGACACACCTCCCACCAGAGCTTCAGATACAATAACCAGACCCACTGAGCCGCCACCTAAAATCCCGCAACCTGCAGAACGCTCCCAGCCCCTGGAGGTGCCGCAGAAACCACACATCTCAGACCTTCCCCCTAAGCCGCAACTGTCTGATCTTCCCCCGAAACCACAATTGTCGGATTTACCGCCAAAACCTCAGCTTTCTGACCTGCCCCCGAAACCACAGCTTAAGGATCTTCCCCCTAAGCCGCAGCTCTCTGACCTCCCATCCAAGCCTTCGATGTCTTCAGCTGCTGAGTCCACACAGAGGCAAACGACACAGGAGGAAACCAGCCCGAAGCCCCAGCTGACAGAGGTGCAGTCATTCAGTCAGCAGGAGGAGCTCTCTCCCAGACAGGCCAGTGAGGACACTAATGGTGCACCTGCAGGAGCTGTGGAGATGCCTGTCCCAATGCCACGGAAAATAAACACAGTAGGAAAGAACAAACTAAGGCGTGTGAAAACCATCTACGATTGCCAAGCAGATAATGATGATGAGCTGACTTTTGTGGAGGGGGAGGTTATAATTGTTACAGGAGAGGAAGACCAGGAGTGGTGGATCGGGCACATAGAGGGGCAGCCTGAAAGGAAAGGGGTCTTCCCAATGTCCTTTGTGCACATTCTGTCAGACTGACAGTGTATAAGCGGCGGCCAAGAAGCTTTCTAACTAGCACAAGCTCCGCTCTCTCTCTCTCTCTCACTCTCTCTGGCCTCACACTGGACTGTGGGCATTGCCTCTGTACATAGCTGCTGAAACCCATACGGTCTCCAAACAAACGAAACATGAAGAATCAAACCCATGCTCCCTTAATCCTCAAGGGTGAAATGTGTAAACTATGTGTTGTTCATAAACTGTGTTATCCTGCCTACCAGTATTATCGTAGCCATGGCAGCCCAGCATGCAAAACTGGGTTTGCAGTAGCTATACTTGGAAATCTAGCACTTAACATGTATGCTGTAACTTTGTGTATGTGTACACATATAGAATTATATGTAAGTCCATTTTAAGTGTGTCTTTGTACATACATATGCACAGATGTAAGTGTATATTTATGTACGTATGTATAATGTACAAGTGTGCAAATGTATGTTAACCCTGCTTGCTTATGGAGCCAGAGTGACTCTAGACATTTTAGTGTACTGTTTTAAAAGAAAAAAAGATCATCTCTTGAATTTTTTGGATGGCATAAATGATAAGCGATAATATACCAGTGTTTAAATTCCCAGCATAGTGGCATGCTGGTCAGGGATCAAAACCAAAATGTAAAGGTTTAAACATCTCATCTGCTATACATAGACGATCAAAATATGCATTCATTCAGTTTGCATCACTCACAAAAAAAAAAAAGAGGAAGCCAGAAATCATCTTTATTCTAACCGCCTCAATGAGACCAATTTACAGCCCTAGAAATTTGCTGGTGTAATGTTACCACTTTGTACCCATATTCTCTCACTATGCCAGTATGTTCATATAGTGGCTGTAGTCAAGGACCAGTCAATATAACCAGTAATAATTTAAGAATGAATTGCTGAAAAGCTCATATCGATCAAATATTCCAGTGTCTATGGTGGTTACAGCCTTGGTTGCATCTGTGGGAACGCTTCATTCCTTCCCCATTGTTGTTTAATGCCAAATCTGACAAAACTGTTGCCTCAGCTCTGGGAAAGTGACCTTGTCGATATTGTTTTATTAGATCACACAATAACCTACCTTATTCATCTGGTCTCATGCATAAATTATAAAGCTTCACTCATACGTGGATATGACTGGTCAAACGTTGTTGGCTTTGTATAAATATGGACATATGTTGAGCAGAACACAATCTGTTAAAGGTTTCTTAGGGTGAGTTTTATTGTTTGCTTACGGTGACTGTGGAATGTGATTTCTTTTGTTCATTTAAGTTGAATTAAA

Function

symbol description
asap1a Predicted to enable GTPase activator activity. Predicted to act upstream of or within positive regulation of GTPase activity. Predicted to be located in cytoplasm. Orthologous to human ASAP1 (ArfGAP with SH3 domain, ankyrin repeat and PH domain 1).
asap1 Enables cadherin binding activity. Involved in cilium assembly. Predicted to be located in plasma membrane. Predicted to be active in cell projection membrane and podosome.

GO:

id name namespace
GO:0005096 GTPase activator activity molecular_function

KEGG:

id description
K12488 ASAP; Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_12048597_12107143.mRNA True 5732 mRNA 0.45 28 12047319 12108201

Neighbor

gene id symbol gene type direction distance location
CI01000004_12025107_12032154 NA coding downstream 14367 12025107 ~ 12032952 (-)
CI01000004_11974708_11980518 NA coding downstream 65024 11974644 ~ 11982295 (-)
CI01000004_11944095_11946749 NA coding downstream 100303 11943785 ~ 11947016 (-)
CI01000004_11930044_11933982 NA coding downstream 113163 11929840 ~ 11934156 (-)
CI01000004_11826038_11848540 AMPH coding downstream 198779 11824907 ~ 11848540 (-)
CI01000004_12111607_12123001 UBTFL, UBF1 coding upstream 2691 12110892 ~ 12123318 (-)
CI01000004_12127993_12144790 SLC4A2A, SLC4A2 coding upstream 18399 12126600 ~ 12144790 (-)
CI01000004_12170772_12177138 TTC19 coding upstream 62316 12170517 ~ 12177138 (-)
CI01000004_12181888_12188055 NA coding upstream 73378 12181579 ~ 12188055 (-)
CI01000004_12191329_12197377 ABCF2B, ABCF2 coding upstream 82433 12190634 ~ 12197377 (-)
G32240 NA non-coding downstream 55500 11991608 ~ 11991819 (-)
G32239 NA non-coding downstream 59492 11987529 ~ 11987827 (-)
G32238 NA non-coding downstream 61509 11985549 ~ 11985810 (-)
G32237 NA non-coding downstream 61891 11985217 ~ 11985428 (-)
G32231 NA non-coding downstream 85941 11961179 ~ 11961378 (-)
G32256 NA non-coding upstream 58327 12166528 ~ 12166744 (-)
G32177 NA non-coding upstream 69742 12177943 ~ 12179824 (-)
G32258 NA non-coding upstream 88172 12196373 ~ 12197128 (-)
CI01000004_12279303_12308271 PUF60, PUF60A non-coding upstream 159686 12278894 ~ 12308271 (-)
G32200 NA non-coding upstream 174449 12282650 ~ 12286780 (-)
G32150 NA other downstream 266368 11776519 ~ 11780951 (-)
CI01000004_11407198_11412220 ADCYAP1B, ADCYAP1 other downstream 634412 11406957 ~ 11412907 (-)
G31203 NA other downstream 1296678 10746437 ~ 10750641 (-)
G30316 NA other downstream 2640398 9377937 ~ 9406921 (-)
G29746 NA other downstream 3689192 8354498 ~ 8358127 (-)
G32207 NA other upstream 267967 12376168 ~ 12384780 (-)
CI01000004_14543631_14551256 NA other upstream 2442599 14541515 ~ 14551352 (-)
G33746 NA other upstream 2460592 14568793 ~ 14569264 (-)
G33750 NA other upstream 2470257 14578458 ~ 14579001 (-)
G33755 NA other upstream 2473205 14581406 ~ 14581873 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location