CI01000004_11974708_11980518


Basic Information

Item Value
gene id CI01000004_11974708_11980518
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 11974644 ~ 11982295 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_11974708_11980518.mRNA
CTTTTGTTGTTGTAGCGTCTGGAGGCAGTTTGGGGAGATGTATGGAAAGCATGACTGAGCCAACGCTGACATTAAGCCTGAAAGAGCACTCTGTGTCCAGGCAGAACAGAGGGGGACACACAGGCATTTAACACACTCACCCAAATTAGCAAGCCCGAGTCGGCTTCCCATCTGATGATGCATAATTACAATAGTCACTGCAGTTGTCTGGGCACAAGTTCAACTCCTCCTCAAAGCGACAAGATAGTTAACAGCTAGCGTTTGTGTGGCAGTAAAGACTGATATAAGAGCTGACCAACCACTAATTACGACACCTTGATTTGAACCCTTCCATGCGTAAAAATAAAATGGAGATTTAACTATTATGGGTGACCACTCTATAACATATAACAGTGCTCCTTTACTGTGGTTTTATGGCTGAACCCTAACCATCTGCAATCAATGAAAACATCCATACCAAGAAGTGCATTATTCACAACCAACCACATCATTTAGAGTCCTCTAAACAATGCTTATTTAGGGATGAGGGTGGTGCTATATGTCGCATGCTGGTTCTCATTAGACTGTACTGTGGAGTGAGTGGATGCTTCAGTCTATCTCCTTCAGTTAAGCCCACTGATGAGAGGCTGGGGTTGCTTCTATTTTAGAGAACGACTGATCCGTAATTTGGAGAGTTTCTGAATAGCTGAGCCATAACCTCATGAGTTCATGAATATGAACTTGATAAACTCATAATGCATAGACTGAGGCTAATGCAAGTTTATATTGAAAAAACATGTAGATTAGAGCCTTACAATGATATATATATATATTTCATACACTACATGCATGAATAACAGCGTTATAAAACAAAATATCAAACCAAGTAGCATTTATTATAAAGAAATATGGCAAAAACACTTTCAAAATAATTTTTTTTAAAGGGGACCTATAATGCCCCTTTTACAAGATGTGATATAAGTCTCTGTGTCCCCAGAATGTGTCAGCTCAAAATAATAATAATAATTTAAATTAAATTGATTTGACACATTTTCACACTCACTTTTCTGAATGTGAGTACAGTTGAACCAAACTAGTTTGTTCATCTCACAGTTTTAAAGGTAGTTCATCTGTCATCATTTACTCACTCTATATCGTTCCAAAAACGACTTTCTTTTTTTCTGTGGAACATAAAAGATGAAAAATGTCTGTTTTTTGTCCCTACATTGAAAGTCAATGGTGTTTAATGTTGTTTTGAACCCCACTGACTTTTTATTTTATGGACAGAAATAGCTGAAATATTATTCAAAATATCTTCTTTTGTGTTCCACATACGGCAGAAAGTCATACGGGTTTGGAACAACATGGAACAACAGGGTTAGTAAATGAAATTTTGGTGAAATACCTCTTTAAGTGTCCAAAAAGTGTCACTGTACATTACCAAAGGCCATCCTGACCAAAAAAAAACTCTTAATACATACAGGCAAAGGAACAACAGAATTGCTAATTCGACCAAAACTGCAAAGGATCCAATTACACCCCATAATGGGACATGCACAATGTGAGCGACAAAGCCTCTTTCCGCCCCTCGGAGAGACGCCGTTGTATACACAGAGCCTGACACCACATGTGAAAGGATTTGATCCCCCCACCCCCCATCTCCGGCCTGCTTTAGACCTGTAGAATGCAGCGCCTAAACATTTCTGTCCTAAAGTCAGCTGTAGTAGGGCTCCGATCCATGAAAGCAGCAAAAAACACTCACTTAGTTTTCACAGAATTACATAAAGGACTATGAAAGATGAATGACGGCAGTTGGAACCTGGCCTGGGAACAACCTTATGGATTTTTTCAACTCTTTCCCTCTGGCATACTGAGGCCCACCACTTTTGTTGAATCTGCTCTGAGAACTGAGCACTTTAACAGCCATTTGTCACTGGCACAGAAAAATACAATTGAAGGGTTTTGTCCCTCAATCACACACAGTCTGGCCTCTGTTAAAGGCTGGCACAGACTCACCAACAGCTGGCCTCTGGCTTTCCACTCTATCAACAAAGATGAAGAGTGCAAAGAAAACAAATGCGACAGCGCTACCTCATTATCCAGGCAATGTGCCAAGACAATCGTCACAGGCCTGGCTGGACATTGCCATGGTGACCACAACGCCAGTCTGCCAGAAGAGCAGCTGGTAAATGGGTAGCAGATTAGGCAAACAGACTTACAGAGAGTCAAGCACTGTGTGTCCAATGCAATGAATGAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_11974708_11980518.mRNA True 2240 mRNA 0.40 3 11974644 11982295

Neighbor

gene id symbol gene type direction distance location
CI01000004_11944095_11946749 NA coding downstream 27628 11943785 ~ 11947016 (-)
CI01000004_11930044_11933982 NA coding downstream 40488 11929840 ~ 11934156 (-)
CI01000004_11826038_11848540 AMPH coding downstream 126104 11824907 ~ 11848540 (-)
CI01000004_11789063_11823381 NA coding downstream 149904 11788496 ~ 11824740 (-)
CI01000004_11768937_11770193 NA coding downstream 204216 11768641 ~ 11770428 (-)
CI01000004_12025107_12032154 NA coding upstream 42812 12025107 ~ 12032952 (-)
CI01000004_12048597_12107143 ASAP1, ASAP1A coding upstream 65024 12047319 ~ 12108201 (-)
CI01000004_12111607_12123001 UBTFL, UBF1 coding upstream 128597 12110892 ~ 12123318 (-)
CI01000004_12127993_12144790 SLC4A2A, SLC4A2 coding upstream 144305 12126600 ~ 12144790 (-)
CI01000004_12170772_12177138 TTC19 coding upstream 188222 12170517 ~ 12177138 (-)
G32231 NA non-coding downstream 13266 11961179 ~ 11961378 (-)
G32230 NA non-coding downstream 14035 11960372 ~ 11960609 (-)
G32229 NA non-coding downstream 14472 11959915 ~ 11960172 (-)
G32228 NA non-coding downstream 14846 11959359 ~ 11959798 (-)
G32225 NA non-coding downstream 19357 11951571 ~ 11955287 (-)
G32237 NA non-coding upstream 2922 11985217 ~ 11985428 (-)
G32238 NA non-coding upstream 3254 11985549 ~ 11985810 (-)
G32239 NA non-coding upstream 5234 11987529 ~ 11987827 (-)
G32240 NA non-coding upstream 9313 11991608 ~ 11991819 (-)
G32256 NA non-coding upstream 184233 12166528 ~ 12166744 (-)
G32150 NA other downstream 193693 11776519 ~ 11780951 (-)
CI01000004_11407198_11412220 ADCYAP1B, ADCYAP1 other downstream 561737 11406957 ~ 11412907 (-)
G31203 NA other downstream 1224003 10746437 ~ 10750641 (-)
G30316 NA other downstream 2567723 9377937 ~ 9406921 (-)
G29746 NA other downstream 3616517 8354498 ~ 8358127 (-)
G32207 NA other upstream 393873 12376168 ~ 12384780 (-)
CI01000004_14543631_14551256 NA other upstream 2568505 14541515 ~ 14551352 (-)
G33746 NA other upstream 2586498 14568793 ~ 14569264 (-)
G33750 NA other upstream 2596163 14578458 ~ 14579001 (-)
G33755 NA other upstream 2599111 14581406 ~ 14581873 (-)

Expression


Co-expression Network