Gene
RNA
| Item | Value |
|---|---|
| gene id | G28801 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000004 |
| NCBI id | null |
| chromosome length | 17451736 |
| location | 8028250 ~ 8033712 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU32563 | False | 3992 | lncRNA | 0.43 | 3 | 8028250 | 8033712 |
| TU32564 | True | 3789 | lncRNA | 0.42 | 2 | 8028250 | 8032070 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000004_08015521_08017006 | NA | coding | upstream | 11236 | 8015297 ~ 8017014 (+) |
| CI01000004_07993172_07997413 | GYG1A | coding | upstream | 30837 | 7993172 ~ 7997413 (+) |
| CI01000004_07987968_07989044 | AGTR1A | coding | upstream | 38721 | 7985367 ~ 7989529 (+) |
| CI01000004_07971396_07974484 | NA | coding | upstream | 53747 | 7971324 ~ 7974503 (+) |
| CI01000004_07962260_07967751 | RAB3A.L, RAB3A, RAB3AA, RAB3AB | coding | upstream | 59643 | 7962260 ~ 7968607 (+) |
| CI01000004_08081989_08097935 | STAG1, STAG1A, STAG1B | coding | downstream | 47992 | 8081704 ~ 8098754 (+) |
| CI01000004_08108419_08111331 | MSL2A | coding | downstream | 74014 | 8107726 ~ 8111666 (+) |
| CI01000004_08177656_08183324 | PPP2R3A | coding | downstream | 143853 | 8177565 ~ 8183595 (+) |
| CI01000004_08200962_08208539 | PPP2R3A | coding | downstream | 165659 | 8199371 ~ 8210704 (+) |
| CI01000004_08243282_08245264 | NA | coding | downstream | 209267 | 8242979 ~ 8245369 (+) |
| G28800 | NA | non-coding | upstream | 2352 | 8025491 ~ 8025898 (+) |
| G28797 | NA | non-coding | upstream | 44473 | 7983481 ~ 7983777 (+) |
| G28791 | NA | non-coding | upstream | 200568 | 7827368 ~ 7827682 (+) |
| G28790 | NA | non-coding | upstream | 206233 | 7821817 ~ 7822017 (+) |
| G28784 | NA | non-coding | upstream | 223597 | 7804266 ~ 7804653 (+) |
| G28819 | NA | non-coding | downstream | 243490 | 8277202 ~ 8284097 (+) |
| G28834 | NA | non-coding | downstream | 331983 | 8365695 ~ 8365921 (+) |
| G28835 | NA | non-coding | downstream | 335149 | 8368861 ~ 8369073 (+) |
| G28843 | NA | non-coding | downstream | 377014 | 8410726 ~ 8411220 (+) |
| G28848 | NA | non-coding | downstream | 437033 | 8470745 ~ 8471884 (+) |
| CI01000004_07654234_07655677 | MRPL34 | other | upstream | 371867 | 7654234 ~ 7656383 (+) |
| CI01000004_06571261_06572539 | SEP15 | other | upstream | 1453829 | 6570771 ~ 6572667 (+) |
| G28302 | NA | other | upstream | 1526163 | 6470028 ~ 6502087 (+) |
| G28165 | NA | other | upstream | 2295249 | 5732589 ~ 5733001 (+) |
| G27805 | NA | other | upstream | 2654447 | 5372825 ~ 5373803 (+) |
| CI01000004_08414451_08436256 | NA | other | downstream | 399993 | 8414316 ~ 8439933 (+) |
| G28859 | NA | other | downstream | 565523 | 8599235 ~ 8599603 (+) |
| CI01000004_08976512_08980033 | TTPA | other | downstream | 942726 | 8976254 ~ 8980984 (+) |
| G30797 | NA | other | downstream | 2463664 | 10497376 ~ 10497788 (+) |
| G31710 | NA | other | downstream | 3603539 | 11637251 ~ 11642400 (+) |
