G30412


Basic Information

Item Value
gene id G30412
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 9748346 ~ 9748560 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU34408
TGCTTTGTCATCAGGTGGTGGATTATCGGCGGAAATGTGAAGCTGTTGTCAAATTGAGATTTTCTAATATGCCTCTATCTGCCAAGTCTATGACTTTATGTTTACTCGGAGGGGGGAATGGAGGGGTCCGAAGGAGGAGAAATGAGAGATCATCGGGTCCGCCGCATCTCATCCGCTTCTCTACATTTCATTTCACCCTCAGTATTCATTTTCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU34408 True 215 lncRNA 0.46 1 9748346 9748560

Neighbor

gene id symbol gene type direction distance location
CI01000004_09703159_09711600 NA coding downstream 36348 9701926 ~ 9711998 (-)
CI01000004_09639469_09656035 NA coding downstream 92311 9638825 ~ 9656035 (-)
CI01000004_09616639_09622200 RNF31 coding downstream 125686 9616639 ~ 9622660 (-)
CI01000004_09609822_09616099 RNF31 coding downstream 132247 9609575 ~ 9616099 (-)
CI01000004_09592354_09593541 XKR4 coding downstream 154805 9592296 ~ 9593541 (-)
CI01000004_09754664_09774588 CDH6 coding upstream 4907 9753467 ~ 9775073 (-)
CI01000004_09779903_09780536 NA coding upstream 30675 9779235 ~ 9780878 (-)
CI01000004_10271350_10272027 NA coding upstream 522638 10271198 ~ 10272206 (-)
CI01000004_10290550_10295288 CAHZ coding upstream 541303 10289863 ~ 10295357 (-)
CI01000004_10436514_10438365 NA coding upstream 687939 10436499 ~ 10439459 (-)
G30377 NA non-coding downstream 58840 9689274 ~ 9689506 (-)
G30376 NA non-coding downstream 59230 9688891 ~ 9689116 (-)
G30370 NA non-coding downstream 89286 9658748 ~ 9659060 (-)
G30369 NA non-coding downstream 89824 9657924 ~ 9658522 (-)
G30316 NA non-coding downstream 369870 9377937 ~ 9406921 (-)
G30432 NA non-coding upstream 48814 9797374 ~ 9797603 (-)
G30448 NA non-coding upstream 67298 9815858 ~ 9816154 (-)
G30572 NA non-coding upstream 116737 9865297 ~ 9866231 (-)
G30593 NA non-coding upstream 140969 9889529 ~ 9889756 (-)
G30600 NA non-coding upstream 148576 9897136 ~ 9897400 (-)
G29746 NA other downstream 1390219 8354498 ~ 8358127 (-)
G29656 NA other downstream 1782846 7964364 ~ 7965500 (-)
G29388 NA other downstream 3116439 6631293 ~ 6631907 (-)
CI01000004_06539836_06541252 NA other downstream 3202774 6538904 ~ 6541252 (-)
G31203 NA other upstream 997877 10746437 ~ 10750641 (-)
CI01000004_11407198_11412220 ADCYAP1B, ADCYAP1 other upstream 1658905 11406957 ~ 11412907 (-)
G32150 NA other upstream 2027959 11776519 ~ 11780951 (-)
G32207 NA other upstream 2627608 12376168 ~ 12384780 (-)
CI01000004_14543631_14551256 NA other upstream 4802240 14541515 ~ 14551352 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_015500 CR925777.1 non-coding NC_007113.7 CM002886.2 27975554 ~ 28038625 (+)