CI01000004_10290550_10295288 (CAHZ)


Basic Information

Item Value
gene id CI01000004_10290550_10295288
gene name CAHZ
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 10289863 ~ 10295357 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_10290550_10295288.mRNA
AGTTGCTGGTCTTTAGCATCCAGGTCTTACAAGTAGAAGAGTGGAACTCATCGAAAGACACAAATAATCATGTCTCACGCTTGGGGTTATGGAGCAACGGACGGTCCAGAACATTGGGCAGAAAGCTTTCCTGTTGCAAATGGACCCAGGCAGTCTCCCATTGATATCGTACCCACCCAAGCACAACACGACCCTTCTCTGAAGCATCTCAAATTGAAGTATGACCCCGCCACCGCGAAGGGCATCCTCAACAATGGCCATTCATTCCAAGTGGATTTCACTGATGACGACAACAGCTCAACTCTGGCTGGAGGCCCCGTCACTGGGATATACAGGTTGAAACAGTTCCATTTCCATTGGGGAAGCAGTGATGACAAGGGCTCAGAGCACACTATTGCCGGAACCAAGTTCCCCTGTGAGCTTCATCTCGTTCACTGGAACACTAAGTACCCAAGCTTTGGAGAAGCTGCCAGTAAGCCTGATGGCCTTGCTGTGGTTGGAGTTTTTCTCAAGATTGGTGCTGCCAATCCAAGACTTCAGAAAGTTTTAGATGCTCTTGATGACATCAGATCAAAGGGCAGACAGACTACATTTGCTAACTTTGACCCTAAAACCTTGCTGCCCACCTCTCTGGATTTCTGGACTTATGAGGGGTCTCTAACTACACCCCCTCTGCTGGAGAGTGTCACCTGGATTGTTCTGAAAGAGCCAATCAGTGTTAGTCCTGCTCAGATGGCTAAATTTCGTAGCCTGTTGTTCACATCGGAAGGAGAGGCACCTTGCTGTATGGTTGACAACTTCAGACCCCCTCAACCTCTCAAGGGACGCAAAGTCCGTGCGTCCTTCAAGTAAATCGAAGCCACAACCCTCCCACTTGCCTTCTGATCATGGTGCTTTTGACTGGTTCACAAAAACATTCCCAGCGCAATTGCTACTGAAACATCACAGTATTTGTTCTCAATCCAGGCCCTTGCTTACACTGCAGTGTTGATAACAAGAAGGCTGGATCTAATCTTCTAAAACTGTCTGTTTGTCATAAATGCCCATATTATTACTTAACGTGAGGAATAATATTTAAAATGCAGTAATTAGTTACCTTTTTCCATGCAGCTGTTATGTAAACTGGACAAATGGGAGATGATTTAAATCCCAGTTAATTTTTGATTGCTTCACTTTGCGCTTAATAGGTACATTTTCTAGCTTTGAGGAATTGCACAATACTCCATGTTGTTCAGTAGGAAAGACATTATGGCAATATGGCTTATGGCAATGTGTGAATATGTCAGTTAAATGTGTGAATGATCGGATATGTTGAAGCTAAAATACCTACAGGGAAACACTCACTAAATGCAATATGTTGTTAAAGTGATTCACTATTTATAAAGAGGAATTTCAAGGGCTTTTAAAGATTGTTTCTGAGAATGATGTCCTGCCGTAGGTACTCTAAGATTTTTTTAGAATTAGAAGTTAATTGAGCAGTATTGCAAACAAATATTATATGTAAATCAGTCATGTATTAGGAATTTTATCAGCAATAAA

Function

symbol description
cahz Enables carbonate dehydratase activity. Acts upstream of or within carbon dioxide transport and hypotonic salinity response. Predicted to be active in cytoplasm. Is expressed in several structures, including hematopoietic system; mesoderm; nervous system; pleuroperitoneal region; and presumptive blood. Human ortholog(s) of this gene implicated in autosomal recessive osteopetrosis 3 and osteopetrosis. Orthologous to several human genes including CA2 (carbonic anhydrase 2).

GO:

id name namespace
GO:0046872 metal ion binding molecular_function

KEGG:

id description
K18245 CA2; carbonic anhydrase 2

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_10290550_10295288.mRNA True 1539 mRNA 0.43 7 10289863 10295357

Neighbor

gene id symbol gene type direction distance location
CI01000004_10271350_10272027 NA coding downstream 17657 10271198 ~ 10272206 (-)
CI01000004_09779903_09780536 NA coding downstream 508985 9779235 ~ 9780878 (-)
CI01000004_09754664_09774588 CDH6 coding downstream 514790 9753467 ~ 9775073 (-)
CI01000004_09703159_09711600 NA coding downstream 577865 9701926 ~ 9711998 (-)
CI01000004_09639469_09656035 NA coding downstream 633828 9638825 ~ 9656035 (-)
CI01000004_10436514_10438365 NA coding upstream 141142 10436499 ~ 10439459 (-)
CI01000004_10458668_10465442 NA coding upstream 163305 10458662 ~ 10465703 (-)
CI01000004_10553379_10573352 PAXIP1 coding upstream 257680 10553037 ~ 10575243 (-)
CI01000004_10619819_10627261 CNPY1 coding upstream 323662 10619019 ~ 10627261 (-)
CI01000004_10692864_10704094 TRPA1A coding upstream 397280 10692637 ~ 10704094 (-)
G31014 NA non-coding downstream 3689 10285210 ~ 10286174 (-)
G30986 NA non-coding downstream 84844 10184093 ~ 10205019 (-)
G30981 NA non-coding downstream 119980 10162961 ~ 10169883 (-)
G30970 NA non-coding downstream 152216 10137283 ~ 10137647 (-)
G30952 NA non-coding downstream 220160 10063129 ~ 10069703 (-)
G31042 NA non-coding upstream 59122 10354479 ~ 10371232 (-)
G31046 NA non-coding upstream 64194 10359551 ~ 10359791 (-)
G31056 NA non-coding upstream 89942 10385299 ~ 10385770 (-)
G31060 NA non-coding upstream 97969 10393326 ~ 10426345 (-)
G31070 NA non-coding upstream 114772 10410129 ~ 10410917 (-)
G30316 NA other downstream 882942 9377937 ~ 9406921 (-)
G29746 NA other downstream 1931736 8354498 ~ 8358127 (-)
G29656 NA other downstream 2324363 7964364 ~ 7965500 (-)
G29388 NA other downstream 3657956 6631293 ~ 6631907 (-)
CI01000004_06539836_06541252 NA other downstream 3744291 6538904 ~ 6541252 (-)
G31203 NA other upstream 451080 10746437 ~ 10750641 (-)
CI01000004_11407198_11412220 ADCYAP1B, ADCYAP1 other upstream 1112108 11406957 ~ 11412907 (-)
G32150 NA other upstream 1481162 11776519 ~ 11780951 (-)
G32207 NA other upstream 2080811 12376168 ~ 12384780 (-)
CI01000004_14543631_14551256 NA other upstream 4255443 14541515 ~ 14551352 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location