G31060


Basic Information

Item Value
gene id G31060
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 10393326 ~ 10426345 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU35156
TAGGACTCAAATTGTGTCTGCATGCTTACAGGAACATCCTCATCATTGTTTTCTTGTACAAACAATATAGACTAAAATAAGAACAAGGGGCTTTGATACTGTACATGAGTTCATGAGGCTACTTGACTTCAACCAACAGAAAAATTCAAAGATTGTTAACCAATAAAATTAGGAAGCACTTTTATAGACTCACACACACACGCAATGCGCACAGGCTCTCACACACACCTATTTACCATAAAGATACATACATTCTTTAAAACACAAACGGACTCGCACACCTGTGTGCATTTAACACGCAAACACGCTCACAAATACACGCGTAAAACATCACCACTGGGAGACCCTGAATTTGCTGCACTCGCTTCATCTCCGTCTTTTCCTGAGAGTTTAACGCTAGTTTAGCTCACCTGACACGGCTGATCAGGCAGAGTCACACGGTCCTCTCAGAGTCACAACCCTTTTGAGCACAAAGCTTACAAAAAACTTCCCCCTGTGCCCCAACACAGTATTAAAACACACATGAAATTAAGTCACTGGAATTGCTACTGGAAAGACATAATCTTGTGAACAATGATGAAAAGCTTGCATTTTATTAGAATTCCCCTTCTCGTGTCATTTTTTTTTGCAGTCGTCTCATTGGAGTACCTCTACTTGTCTACATAAAAATCCACAGAAGGCCCCAAATCTATGTTAGAAAAATGATTAGTAGGTTTATTTGTATTGTATACACTAAAGAATATAATAATGTGCCTAAATGTCCCACGTATGACTAAAGAGGTTTTAAAATAAGAAGAACTGTTCAAGAGTGGCCAAGCGTTCACAATAGCAAGCATCAGAATGACAAGAAACAGAAATGGCTACGGAATAGTGAAGGCATCTTTTCATTAGCGATGAATCACTTTTACATCAAAATAATGTAGTATGATTAGAATTTTTATGAGTATTGCTTTTAGCTGAAAATACCCTGTTATGTGGTAATAATTTTCCAATTGTACTACAAAAAAAAAAAAAAAAAAAAAAAAAGGGCAGAGATGGAAGCGAAAAAATTGCAAAACATTCTGCTCTTCTGAGAAAAACAGAAATGCTAAAAGACAATAGGATACAGTATTTCTAGATTGTAAGATGGACTGAGAGAAAGAGAGAGAGAGAGAGGGTTTACCTACTTCACATGGCTAGGAACATAATTCACTATGATCACATCTCTTCAGATCATCAGATTAAGACAGTTTGTGAAAGAGAGAGACTGATGGGAGAAGTAAAACATTAAACCTGCTATAAAATTCCTTCAACCCTCAAGGGAAAAGGTACAGACAGATTATATTACAAACCCCCAGCCCATTCCACTCAAAGTGAATACGCTTATGTTTATTATCTGTTATAAGTCCGTGTAGAGCTGTTAAATGATAAAGTATATATGTGTGTATATGCCCACGTTTATCTACACGGAGAGCAAAGGTCAGCCTATGGCTCTGAGAGAGGTCGCTATGCATGTCTGTGTGTATATGTGATTACAAACAAACTGTATGTAACCACACGTGCAAAGAAAAATATTTAATATAAAGTGGCTGAGCTCCAAATGGTGTGTGTGTGCGAATGATATTATTCAGGGTAGACATATTTAATTTGATGTGAATGAAAGCGAGGCTGTAAAGGAACAGTTGAGCTATTGATAATATGATGTGAGGTCTAAAGTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU35156 True 1697 lncRNA 0.45 2 10393326 10426345

Neighbor

gene id symbol gene type direction distance location
CI01000004_10290550_10295288 CAHZ coding downstream 97969 10289863 ~ 10295357 (-)
CI01000004_10271350_10272027 NA coding downstream 121120 10271198 ~ 10272206 (-)
CI01000004_09779903_09780536 NA coding downstream 612448 9779235 ~ 9780878 (-)
CI01000004_09754664_09774588 CDH6 coding downstream 618253 9753467 ~ 9775073 (-)
CI01000004_09703159_09711600 NA coding downstream 681328 9701926 ~ 9711998 (-)
CI01000004_10436514_10438365 NA coding upstream 10154 10436499 ~ 10439459 (-)
CI01000004_10458668_10465442 NA coding upstream 32317 10458662 ~ 10465703 (-)
CI01000004_10553379_10573352 PAXIP1 coding upstream 126692 10553037 ~ 10575243 (-)
CI01000004_10619819_10627261 CNPY1 coding upstream 192674 10619019 ~ 10627261 (-)
CI01000004_10692864_10704094 TRPA1A coding upstream 266292 10692637 ~ 10704094 (-)
G31056 NA non-coding downstream 7556 10385299 ~ 10385770 (-)
G31042 NA non-coding downstream 22094 10354479 ~ 10371232 (-)
G31046 NA non-coding downstream 33535 10359551 ~ 10359791 (-)
G31014 NA non-coding downstream 107152 10285210 ~ 10286174 (-)
G30986 NA non-coding downstream 188307 10184093 ~ 10205019 (-)
G31077 NA non-coding upstream 7809 10434154 ~ 10435536 (-)
G31089 NA non-coding upstream 30035 10456380 ~ 10458603 (-)
G31105 NA non-coding upstream 54472 10480817 ~ 10481122 (-)
G31140 NA non-coding upstream 115604 10541949 ~ 10542189 (-)
G31135 NA non-coding upstream 118289 10544634 ~ 10550641 (-)
G30316 NA other downstream 986405 9377937 ~ 9406921 (-)
G29746 NA other downstream 2035199 8354498 ~ 8358127 (-)
G29656 NA other downstream 2427826 7964364 ~ 7965500 (-)
G29388 NA other downstream 3761419 6631293 ~ 6631907 (-)
CI01000004_06539836_06541252 NA other downstream 3847754 6538904 ~ 6541252 (-)
G31203 NA other upstream 320092 10746437 ~ 10750641 (-)
CI01000004_11407198_11412220 ADCYAP1B, ADCYAP1 other upstream 981120 11406957 ~ 11412907 (-)
G32150 NA other upstream 1350174 11776519 ~ 11780951 (-)
G32207 NA other upstream 1949823 12376168 ~ 12384780 (-)
CI01000004_14543631_14551256 NA other upstream 4124455 14541515 ~ 14551352 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_016455 NA non-coding NC_007113.7 CM002886.2 29694708 ~ 29698281 (-)