Gene
RNA
| Item | Value |
|---|---|
| gene id | G43393 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000006 |
| NCBI id | null |
| chromosome length | 13024002 |
| location | 3879028 ~ 3879651 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU49257 | True | 624 | lncRNA | 0.34 | 1 | 3879028 | 3879651 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000006_03853517_03857679 | ADSSL, PURA2 | coding | downstream | 21349 | 3853517 ~ 3857679 (-) |
| CI01000006_03850934_03852259 | NA | coding | downstream | 26724 | 3850934 ~ 3852304 (-) |
| CI01000006_03841667_03847765 | STX5AL, STX5 | coding | downstream | 31263 | 3841321 ~ 3847765 (-) |
| CI01000006_03814498_03821222 | NA | coding | downstream | 57806 | 3814433 ~ 3821222 (-) |
| CI01000006_03782744_03792823 | ESRRA | coding | downstream | 85744 | 3782699 ~ 3793284 (-) |
| CI01000006_04131548_04142994 | SUPT6H | coding | upstream | 251709 | 4131360 ~ 4142994 (-) |
| CI01000006_04144468_04144836 | NA | coding | upstream | 264817 | 4144468 ~ 4145103 (-) |
| CI01000006_04154152_04182430 | CALN2, CALN1 | coding | upstream | 274444 | 4154095 ~ 4182430 (-) |
| CI01000006_04232222_04238240 | NF2B, NF2 | coding | upstream | 352257 | 4231908 ~ 4238240 (-) |
| CI01000006_04244321_04245262 | NA | coding | upstream | 364243 | 4243894 ~ 4247214 (-) |
| G43383 | NA | non-coding | downstream | 12831 | 3865945 ~ 3866197 (-) |
| G43380 | NA | non-coding | downstream | 15260 | 3863541 ~ 3863768 (-) |
| G43379 | NA | non-coding | downstream | 15690 | 3863113 ~ 3863338 (-) |
| G43377 | NA | non-coding | downstream | 16514 | 3862045 ~ 3862514 (-) |
| G43378 | NA | non-coding | downstream | 17320 | 3861481 ~ 3861708 (-) |
| G43220 | NA | non-coding | upstream | 8255 | 3887906 ~ 3888705 (-) |
| G43190 | NA | non-coding | upstream | 46284 | 3925935 ~ 3945720 (-) |
| G43212 | NA | non-coding | upstream | 69623 | 3949274 ~ 3950674 (-) |
| G43449 | NA | non-coding | upstream | 130366 | 4010017 ~ 4010320 (-) |
| G43453 | NA | non-coding | upstream | 134424 | 4014075 ~ 4014297 (-) |
| G43102 | NA | other | downstream | 945044 | 2908451 ~ 2933984 (-) |
| CI01000006_02624725_02626124 | COX8A | other | downstream | 1252842 | 2624436 ~ 2626776 (-) |
| G42934 | NA | other | downstream | 1296822 | 2523776 ~ 2582206 (-) |
| CI01000006_02285649_02294759 | NA | other | downstream | 1584030 | 2284994 ~ 2296494 (-) |
| G42667 | NA | other | downstream | 1988272 | 1888988 ~ 1890756 (-) |
| G43549 | NA | other | upstream | 472859 | 4352510 ~ 4355428 (-) |
| CI01000006_04560607_04560993 | NA | other | upstream | 679858 | 4559509 ~ 4562068 (-) |
| CI01000006_06974359_06976736 | NA | other | upstream | 3093573 | 6973224 ~ 6976872 (-) |
| CI01000006_07500281_07507754 | NA | other | upstream | 3623494 | 7500246 ~ 7507976 (-) |
| CI01000006_10453630_10483241 | NA | other | upstream | 6603205 | 10453613 ~ 10484006 (-) |
