CI01000006_03853517_03857679 (ADSSL, PURA2)


Basic Information

Item Value
gene id CI01000006_03853517_03857679
gene name ADSSL, PURA2
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 3853517 ~ 3857679 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000006_03853517_03857679.mRNA
ATGTCTAATGGCCAGGAAACGGCATCTCTGAACGGTGAACCCGTGCTCAAGCGCTCCAGAGACAGCGTGGACTCACTGCGGATCCTGCGGGAGCCCCAGAATAAAGTGACCGTAGTGTTAGGAGCTCAGTGGGGAGATGAGGGGAAAGGGAAAGTGGTCGACCTCCTGGCAATGGACGCCGACATTGTATGCAGATGCCAGGGTGGAAATAACGCGGGACACACAGTGGTGGTGGACTCAGTAGAGTATGACTTTCACCTGCTTCCTAGTGGCGTTCTCAACAAAAAGGCCACCTCATTTATTGGAAATGGTGTTGTGATACACCTGCCAGGACTTTTTGAGGAGGCTGAGAAGAACTCTCAGAAAGGCAATGCGCTGTTAGATGAAGTATTTATGGTTTATTTTTTTCCCCCGACTTTGTTTAATTTAGGACTTCAAGGATGGGAGGAGCGACTGAAGATATCTGACCGGGCACATATTGTGTTCAACTTCCATCAGGCCGTTGATGGGATACAGGAGCAGCTGAGACAGCAGCAGGCAGGGAAGAATTTGGGCACCACTAAGAAGGGCATTGGACCTGCATATTCCTCCAAAGCAGCACGTAATGGACTGAGAGTGTGCGATCTGGTCTCAGACTTCTCAGTATTTGAGGAAAAGTTTCGGGTACTGGCTGGTCATTTTCAGACCACATATCCTAACCTTAATATTGATATTGATGCTGAGCTGGAGCAACTGAAGGGTTATGCTGAGAGGTTACGGCCTCTAGTAACTGATGGGGTTTATTTCATGCACAAAGCCCTTACTGGACCAAGCAAGAAGATTCTGGTGGAAGGAGCTAATGCTGCCTTACTGGATATTGATTTCGGTATGAATGGCAATCCCACATACACAGGAAGATCCACTGGGACCTACCCCTTTGTGACCTCGTCAAACTGTACTGTCGGAGGCGTTTGCACAGGCCTTGGAGTCCCTCCATCTCATGTTGGCCGTGTGTATGGAGTGGTGAAGGCCTACACCACCAGGGTGGGAGTGGGAGCATTCCCTACTGAGCAAGATAATGACACTGGCAATCTGCTGCAGAGCAGAGGGAGGGAAGTTGGCGTCACAACAGGCAGGCGGCGTCGCTGTGGATGGCTGGACTTGGTTTTGGTTCGCTATGCCCACATGGTTAATGGTTTTTCAGCCATTGCTCTGACCAAGTTGGACATTCTTGACACATTGCCAGAAATAAAGATCGGCATAGCCTACACAGTTGATGGAAAGCCTCTTCCCAGTTTTCCTGCAAACATGGACGTCCTCACAAAGGTTCAAGTGACTTACGAGACGTTCCCTGGCTGGTGTTGTAACACTGAGGGAGTGCGCAGTTTTGATGAGCTACCCTCACAGGCACAAGCTTACATTCGATTTATCGAAACTTTCCTGCAGGTGCCAG

Function

symbol description
adssl Predicted to enable adenylosuccinate synthase activity. Predicted to be involved in 'de novo' AMP biosynthetic process and IMP metabolic process. Predicted to act upstream of or within purine nucleotide biosynthetic process. Predicted to be active in cytoplasm. Orthologous to human ADSS2 (adenylosuccinate synthase 2).

GO:

id name namespace
GO:0004019 adenylosuccinate synthase activity molecular_function

KEGG:

id description
K01939 purA, ADSS; adenylosuccinate synthase

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000006_03853517_03857679.mRNA True 1432 mRNA 0.50 12 3853517 3857679

Neighbor

gene id symbol gene type direction distance location
CI01000006_03850934_03852259 NA coding downstream 1213 3850934 ~ 3852304 (-)
CI01000006_03841667_03847765 STX5AL, STX5 coding downstream 5752 3841321 ~ 3847765 (-)
CI01000006_03814498_03821222 NA coding downstream 32295 3814433 ~ 3821222 (-)
CI01000006_03782744_03792823 ESRRA coding downstream 60233 3782699 ~ 3793284 (-)
CI01000006_03771304_03775923 NA coding downstream 77385 3771024 ~ 3776132 (-)
CI01000006_04131548_04142994 SUPT6H coding upstream 273681 4131360 ~ 4142994 (-)
CI01000006_04144468_04144836 NA coding upstream 286789 4144468 ~ 4145103 (-)
CI01000006_04154152_04182430 CALN2, CALN1 coding upstream 296416 4154095 ~ 4182430 (-)
CI01000006_04232222_04238240 NF2B, NF2 coding upstream 374229 4231908 ~ 4238240 (-)
CI01000006_04244321_04245262 NA coding upstream 386215 4243894 ~ 4247214 (-)
G43368 NA non-coding downstream 46668 3806636 ~ 3806849 (-)
G43360 NA non-coding downstream 77065 3776221 ~ 3776452 (-)
CI01000006_03737857_03742809 GNG4, GNG2, GNG3 non-coding downstream 111085 3736572 ~ 3742820 (-)
G43357 NA non-coding downstream 113770 3739097 ~ 3739747 (-)
G43339 NA non-coding downstream 316301 3536955 ~ 3537216 (-)
G43378 NA non-coding upstream 3802 3861481 ~ 3861708 (-)
G43377 NA non-coding upstream 4366 3862045 ~ 3862514 (-)
G43379 NA non-coding upstream 5434 3863113 ~ 3863338 (-)
G43380 NA non-coding upstream 5862 3863541 ~ 3863768 (-)
G43383 NA non-coding upstream 8266 3865945 ~ 3866197 (-)
G43102 NA other downstream 919533 2908451 ~ 2933984 (-)
CI01000006_02624725_02626124 COX8A other downstream 1227331 2624436 ~ 2626776 (-)
G42934 NA other downstream 1271311 2523776 ~ 2582206 (-)
CI01000006_02285649_02294759 NA other downstream 1558519 2284994 ~ 2296494 (-)
G42667 NA other downstream 1962761 1888988 ~ 1890756 (-)
G43549 NA other upstream 494831 4352510 ~ 4355428 (-)
CI01000006_04560607_04560993 NA other upstream 701830 4559509 ~ 4562068 (-)
CI01000006_06974359_06976736 NA other upstream 3115545 6973224 ~ 6976872 (-)
CI01000006_07500281_07507754 NA other upstream 3645466 7500246 ~ 7507976 (-)
CI01000006_10453630_10483241 NA other upstream 6625177 10453613 ~ 10484006 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
mexican tetra (Astyanax mexicanus) G121312 LOC108439764,LOC107700025,LOC107715360,LOC107756158,LOC107669388,LOC107548223,LOC108279199 non-coding NC_035910.1 CM008313.1 11615161 ~ 11620970 (-)