CI01000006_04244321_04245262


Basic Information

Item Value
gene id CI01000006_04244321_04245262
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 4243894 ~ 4247214 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000006_04244321_04245262.mRNA
ATTGTATATTAATTAAAAAAAGTCTGCTGAAACATTCATTAATAGGGGTGATTCTGTCACTTTCATCACCGTTCTTTCCTTAAGACCTACATTGCCCCATGCCGGGGTTTTGTACTGACATTTAAACTAATGTCAATGAAAAGCTTCTAGTAACATGTAACCTAGAAAAATCATGTGTATTTGGCAACAAATGGTATTGTGTATTCAAAATATTTTTGTTTAGACTTTCATTCAATATAATTGCCAATATATTATACACTACTGTTCAAAAGTTTGGGGTGGGTAAGATTTTTTGATGTTTTTGAAAGATGTCTCTTAAGCTCACCAACTGTTTTCTATTTTAAATCTATTTTATCAATATTGAAAACTGCTGATCTGTTTAATATTTTTGTGGAAACCATGATACTTTTTTTCAGCATTCGTTCAAAAAAACAGCAAAAGAATCAATTACTTAAAATCTTACTGACCCCAAACTTTTAAATGGTACTGTAATAATATAAATTTTTTCATTTCATCATTCTATATTAAAAATGTATATCAAGCATGCTTTAGTTGCAGCCAATCTGTTTTTATTTGCAGTCATCAATCTATGTAATTATCCAGAGGGTTATTTTTCATAGTTTTACCTCATATTATAGTTAGGAACCATTATCCATATGACATGTAGCAATGTGTACTTAATAAAAAATATAACTGAACTCAAACATTGTGATTGTGTATTTCCCCAAAATAAAATATTCATAACTTTCTGAATATTCATAAAGAGTCAATAAATACTAGTAAAGAACGTTATTGCCAGCATAAACGTTCTGTTTATAAATGTTTGCTTCAGATTCTGATGTTTTTTTACAACAGGAAGAGACTGACCTCACTATTTTTTCCAGTAGGTATTTTCCACACTATGCTGTGAAGGTACAAATGACTCAGAACTACTGTGTCAACTCTTAGGTATGATGATGACAGCAAAATCTAAATGTAATGAGCAACCTTTGCATTCTCTTCAATGTTTACCTGTAGGAAAATTGTTTTGATAAATGCTCTGTGACTCATCATGTCTAGTCATCTGAAACTAAGCTAAGGTTGTGAACATGGTAACAACAATCCTGTTTCGCATTCATATAATTCATTTAGAACTTTATTTAACTTTTACAATTTATAAACTTAGTTGTTAGTCCTTTAAATTAGTAACCACACTTGCCTTCCATATTATGTGTATCATAAATATGTAAATGACAGTAAAGTCATTTTACAATCGTTCATACAGATAATAGTTCACCCAAAAATGAAAATTATTACATTATTCACTCATGTTGTTCCAAACTTATATTGCTTCTGTAGAACATATTTTGAGAAACGTATCAGTGTTTTTTTGTCCATACAATGAAAGTTAATAGTCACCAAAACTATTGGTTTCCAACATTCTTCAAAATATCTTCTATTTTCTATGAAGTTCCATGGAAAAAAAAAAGAAAGTCATTCAAGTTCAAAACGACATGAGGGTAGAGTTATAGCATCAATTATGAACGTTTCATGGGATACAGGGGCTGCCTCAGTGGTCAGATCTCAAACAGAAAAACAAAAGCGTGAGATCGAAACTGCATTTGGATACCTGAACACAAGTGATGCACAAACACCTGAGCCCTCTTCAGGAGTCCAACACAAATATCCAAATTTCCTCTTTTTACATGACCCGCCCATATTGTCCAAGGAATCTGGTTAGTCTGGTAGCATGCGGACTAATGGAGGCATGGTCTGTGGAACTGCACACGCCTCCCAGTCATACTCTTTCTTTTTAGTATACAAACACCTCATCACTGTCACCAGAGTGAAAGCTGAGCTGCAGACAGGAATGAGTGAAGGAGGAAACAAGGCCTTCAAAAAGGCTTTAACCGGTGAGAGGAACGAAGAGGCCTCAGTTTAACAGTGGACGTGTATAATTTAACCCCAGCGAGATGGCTTCCCTTGGCATGCACATGCTGGCGAGTGCCTTGGCCTTACTGGGATGGACGGGAGCCCTCCTGTCCTGCATCATGCCAATGTGGCGTGTGACAGCCTTCATTGGAACCACCATTGTCACCTCAGAGACCATGTGGGAGGGCATTTGGATGAGCTGCGTGATACAAAGCACAGGCCAAATGCAGTGCAAACCGTACGAGTCCACGCTCGCACTAAGCTCAGATCTGCAGGCTGCTCGGGCTCTCACAGTAATGTCCATCCTTTTAGGAGCAGTGGGCCTTGTTTTAGCCTTCATCGGAGGAAAGTGCACCATCTTCATGGGCAGTTCCAAAAGATCCAAAGCCAGAATTGCCACAGCGGCCGGCGTGACGTTGATCGTCGCTGGAATTCTCTGCATTATCCCTGTCTCCTGGTCGGCTGGCATTGTGGTGCAAACGTTTTACAACCCGCTGATGACCAATTCGCAGCGCAGGGAGATTGGTGGTGCCATTTATGTTGGTTGGGGTGCATCTGTCGTCCTCATGTTGGGTGGAGGAATGTTGTGCACCACCATCTGCAAAGACAAAACAGAGGATGACAGCGGTCCTTCAGTGAAGTACCTGATCGTGCGCTCTTCGCAGGCAGGGTCCAGCAGGGCGGGCTCGCACAGGATGCGCCCCATCTCTGTGAGGTCAATGCAGAGTGCCACTCCATCTGTGAGGTCCCAATGGAGTCAGAAAGCCCCACTGAATCAGGGTAGACCTCCCTCCACAGACTCCTACCAGAGCAAGCCATCAACTACAAAGTCCCAGCTTGCCAGAGCCGAATCGATGCCAGAGTCTGAGGAGGACAAGGGGGCGTGGACAAAGTCCCAGCTGATTGATGATGGTTTGGATCAAATGCTGGCCCCCTCTGAACCTAGTGAGACTCCTGAAGATGCTCCAAAGACATACATTTGATTAAGAAGACAATGAAAATGCAAGATCTGTGTTGACTCAGGGGACTTTCATGGACTTGGACAGTCATATACCTGCTGTGAATTACGAATTATTGGTCAAATGAAGAAACTAAGAATTAAACTAAGAATTTAGTGGCTGAAATTGATAATGATCACAGTTGCTTATTTAGTTTATTTTGATTTTTTTTTTTTTAGAGAATTGGAGGCACTTTAGGAAATGCAGCTAATTGAGATGAAGATTTGCACTGTGATTACACTCAGACCTCAGCAGTCAAGATTATTATTGTTGTTTTATAGTTCATTTTAATAGCTTTGATACATTTTATGTCTTTAATGTGTATATTTACACTAAATAATGTATATTCATGATTGTATGTGGTAAAATGTTTCCCCCTCATGCTATTTACATATATAATGTCATGAATAAA

Function

NR:

description
Claudin a

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000006_04244321_04245262.mRNA True 3321 mRNA 0.39 1 4243894 4247214

Neighbor

gene id symbol gene type direction distance location
CI01000006_04232222_04238240 NF2B, NF2 coding downstream 5654 4231908 ~ 4238240 (-)
CI01000006_04154152_04182430 CALN2, CALN1 coding downstream 61464 4154095 ~ 4182430 (-)
CI01000006_04144468_04144836 NA coding downstream 98791 4144468 ~ 4145103 (-)
CI01000006_04131548_04142994 SUPT6H coding downstream 100900 4131360 ~ 4142994 (-)
CI01000006_03853517_03857679 ADSSL, PURA2 coding downstream 386215 3853517 ~ 3857679 (-)
CI01000006_04247383_04247973 CLDN28B coding upstream 102 4247316 ~ 4247973 (-)
CI01000006_04251946_04252512 NA coding upstream 4485 4251699 ~ 4252512 (-)
CI01000006_04255653_04256279 CLDND coding upstream 8340 4255554 ~ 4256310 (-)
CI01000006_04259401_04260036 NA coding upstream 12039 4259253 ~ 4260071 (-)
CI01000006_04262648_04264650 CLDNB coding upstream 14989 4262203 ~ 4264683 (-)
G43525 NA non-coding downstream 40637 4203051 ~ 4203257 (-)
G43522 NA non-coding downstream 61610 4182080 ~ 4182284 (-)
G43520 NA non-coding downstream 64550 4179053 ~ 4179344 (-)
G43516 NA non-coding downstream 77316 4166315 ~ 4166578 (-)
G43539 NA non-coding upstream 17750 4264964 ~ 4273914 (-)
G43546 NA non-coding upstream 119870 4367084 ~ 4367884 (-)
G43573 NA non-coding upstream 121186 4368400 ~ 4368617 (-)
G43578 NA non-coding upstream 136083 4383297 ~ 4384353 (-)
G43582 NA non-coding upstream 139066 4386280 ~ 4386480 (-)
G43102 NA other downstream 1309910 2908451 ~ 2933984 (-)
CI01000006_02624725_02626124 COX8A other downstream 1617708 2624436 ~ 2626776 (-)
G42934 NA other downstream 1661688 2523776 ~ 2582206 (-)
CI01000006_02285649_02294759 NA other downstream 1948896 2284994 ~ 2296494 (-)
G42667 NA other downstream 2353138 1888988 ~ 1890756 (-)
G43549 NA other upstream 105296 4352510 ~ 4355428 (-)
CI01000006_04560607_04560993 NA other upstream 312295 4559509 ~ 4562068 (-)
CI01000006_06974359_06976736 NA other upstream 2726010 6973224 ~ 6976872 (-)
CI01000006_07500281_07507754 NA other upstream 3255931 7500246 ~ 7507976 (-)
CI01000006_10453630_10483241 NA other upstream 6235642 10453613 ~ 10484006 (-)

Expression


Co-expression Network