Gene
RNA
| Item | Value |
|---|---|
| gene id | G43520 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000006 |
| NCBI id | null |
| chromosome length | 13024002 |
| location | 4179053 ~ 4179344 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU49390 | True | 292 | lncRNA | 0.51 | 1 | 4179053 | 4179344 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000006_04144468_04144836 | NA | coding | downstream | 33950 | 4144468 ~ 4145103 (-) |
| CI01000006_04131548_04142994 | SUPT6H | coding | downstream | 36059 | 4131360 ~ 4142994 (-) |
| CI01000006_03853517_03857679 | ADSSL, PURA2 | coding | downstream | 321374 | 3853517 ~ 3857679 (-) |
| CI01000006_03850934_03852259 | NA | coding | downstream | 326749 | 3850934 ~ 3852304 (-) |
| CI01000006_03841667_03847765 | STX5AL, STX5 | coding | downstream | 331288 | 3841321 ~ 3847765 (-) |
| CI01000006_04232222_04238240 | NF2B, NF2 | coding | upstream | 52564 | 4231908 ~ 4238240 (-) |
| CI01000006_04244321_04245262 | NA | coding | upstream | 64550 | 4243894 ~ 4247214 (-) |
| CI01000006_04247383_04247973 | CLDN28B | coding | upstream | 67972 | 4247316 ~ 4247973 (-) |
| CI01000006_04251946_04252512 | NA | coding | upstream | 72355 | 4251699 ~ 4252512 (-) |
| CI01000006_04255653_04256279 | CLDND | coding | upstream | 76210 | 4255554 ~ 4256310 (-) |
| G43516 | NA | non-coding | downstream | 12475 | 4166315 ~ 4166578 (-) |
| G43513 | NA | non-coding | downstream | 15981 | 4162782 ~ 4163072 (-) |
| G43500 | NA | non-coding | downstream | 82159 | 4096655 ~ 4096894 (-) |
| G43468 | NA | non-coding | downstream | 149481 | 4029259 ~ 4029572 (-) |
| G43453 | NA | non-coding | downstream | 164756 | 4014075 ~ 4014297 (-) |
| G43522 | NA | non-coding | upstream | 2736 | 4182080 ~ 4182284 (-) |
| G43525 | NA | non-coding | upstream | 23707 | 4203051 ~ 4203257 (-) |
| G43539 | NA | non-coding | upstream | 85620 | 4264964 ~ 4273914 (-) |
| G43546 | NA | non-coding | upstream | 187740 | 4367084 ~ 4367884 (-) |
| G43573 | NA | non-coding | upstream | 189056 | 4368400 ~ 4368617 (-) |
| G43102 | NA | other | downstream | 1245069 | 2908451 ~ 2933984 (-) |
| CI01000006_02624725_02626124 | COX8A | other | downstream | 1552867 | 2624436 ~ 2626776 (-) |
| G42934 | NA | other | downstream | 1596847 | 2523776 ~ 2582206 (-) |
| CI01000006_02285649_02294759 | NA | other | downstream | 1884055 | 2284994 ~ 2296494 (-) |
| G42667 | NA | other | downstream | 2288297 | 1888988 ~ 1890756 (-) |
| G43549 | NA | other | upstream | 173166 | 4352510 ~ 4355428 (-) |
| CI01000006_04560607_04560993 | NA | other | upstream | 380165 | 4559509 ~ 4562068 (-) |
| CI01000006_06974359_06976736 | NA | other | upstream | 2793880 | 6973224 ~ 6976872 (-) |
| CI01000006_07500281_07507754 | NA | other | upstream | 3323801 | 7500246 ~ 7507976 (-) |
| CI01000006_10453630_10483241 | NA | other | upstream | 6303512 | 10453613 ~ 10484006 (-) |
