stk17a (stk17a)


Basic Information

Item Value
gene id stk17a
gene name stk17a
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035906.1
NCBI id CM008309.1
chromosome length 35377769
location 6227605 ~ 6275310 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022673429.1
TTGGAGTGAGCGAAGCAGAGAGCTGCTGGGGAGCTGGAGAAGTTGGATAGTGAGTTAGTTAGCAGGCTGGTTATTTAGCCTGTTCCTGCAGAAAACAGCAGATTTTCATACCCTCAGACTGTGGAGGAAGATGAAGGTTCTGTTAGTCGACTTTTTATAAGCGTATAATTTGAATTAGAGCGGCTATTTGCTGTAGTTTAGTAGATTTAGTAGATTTAGTTAGCTAACAGTAAGCGTTACTGAGTGAACTGTGGGCTGCAGtcagtaagtgagtgagtgagtgcgagTTTCGCTGTAACGTTAATTTACCGATAAAAATAAGCGTTTCTCCAGCGTGTATCGCTCACCCAGTCCGCCGGTATGATCCCCGAGTGTCCGGTGAGGAGCCGGGCTCAGTCCAGCAGCCTCAGCCGCTCTGGTTTACTCAGCGAGGTCAAGACCAACATCAGGACAGGGCCCTTCTCCGACCACTACAGCCTCATACCTGGGAAAGAGCTGGGCAGGGGGAAGTTTGCAGTGGTGAGGAAGTGTGTGGAGAAAAGCACCGGTCGAGAGTATGCTGCAAAGTTTatgaggaagaggagaaagGGCCAGGACTGCCGAACAGAAATCATTCATGAGATTGCTGTTCTGGAGCTGGCAGCTTCCTGCCAACGAGTGGTCAACCTGCATGAAGTTTACGAGCTTCCCAGCGAGATGGTGCTCGTTTTGGAGTTTGCTGCCGGTGGTGAGATCTTTAACCAGTGTGTGGCAGAAAGAGACGAGGCCTTTAAGGAGGAGGATGTGAAGCGATTATTGAGACAGATCCTTGAGGGCGTCTCCTTCCTTCACAAGCGTGACGTTGTTCATCTGGACCTAAAGccaCAAAATATTCTTCTGACCAGTAACGACCCTCTTGGGGACATAAAGATAGTGGACTTTGGTCTGTCACGGATGGTGAGCAATAACCAGGAAATCAGGGAGATCATGGGCACACCAGAATATGTCGCCCCTGAAGTTCTGAATTATGAGCCCATAAGCACAGCCACCGATATGTGGAGTATTGGTGTCCTTGCCTATGTGATGCTGACTGGTATCTCTCCATTCTTGGGAGATGATAAGCAGGAGACCTTCCTGAACATCTCCCAGATTAACATCAGCTACACAGAAGAAGAGTTGGAACAGTTGGATAAGGCTGCCATCCAGTTCATCAAGTCCCTGCTCATCAAAGAGCCTGAGGGCCGTGCCACTGCTGAGGAGTGCCTGAAACACCAGTGGCTTCAGACACAGGAGAAAAATTCTGTGGAGGAGCCAGCGATGCAGAAAAGTGCCTCCACCTCAGTCTCAGAGCCAGCCAGCCCAGAGATCTCCTCCCAGCAGAGaacagaagaggaggaggaggatggaaGAGTGACGGAGGAGCTCATTGTGATGGCCGCTTATACTCTGGGTCAGTGTCGGCAGTCCTCAGACAAGGAGAGTCTGACCCCGGACCAGAAGGCCATCTCCAAGCGATTCAAATTCGAAGAGCCCTTCCCTGCCCTCCAGGAAGTGCCCGGAGAATTCATCTACTGAACCACGTGTTGGCCATCCAGCCGCTAAGCTCCAACTAACGCCCGCACTTCAGACGAGAACGTCTTTTCCTTTCTACTTTAACCCACCTCATTGTTTGACCCTGTAAGCCAAAATGTgtattctttgtttgtttattttattattattttatatctaaTGTTTGTGCTGCTTCACTCATACATAGTTCTGTAACTGAAGACTAAGCCTTGCTGTGGTACTCTGGTTCTTCTCCCCATTTTCCCTTTTGCTTTTTTCCTTTTGGTGCCATGCTTGCAATTGTATGAAAATGTGGGCCATGAACTGAATCTCATCTCATTTATCtttccctctgttttttttgttgcatttccTATATTTTCATCTTTGGTTACAACTTTTGTAAacataaatattgttgtttgtGCAGGGGGAGGGTGGGGCTAAAGAAATTATATGTAAATGGAATAAATTTTAAGAGTTGTGTCTATactttttaaaagccatttatgTGTTTGCAGCTCGTCcagtgtgattgtgattgtcaGGCCAACCCTTTTTATAAAAAGCCCTTTAGTTATGATTGTAAATTGATGATAGGTCAGAGTATATCTTTTAAATGATGACACATTTGAAAGTTAACTGTCCTGATATTGTAAATAAAGTTCCTCTCCAAGCTG

Function

symbol description
stk17a Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in intracellular signal transduction and positive regulation of apoptotic process. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in nucleus. Orthologous to human STK17A (serine/threonine kinase 17a).

NR:

description
PREDICTED: serine/threonine-protein kinase 17A-like

GO: NA

KEGG:

id description
K08804 STK17; serine/threonine kinase 17

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022673429.1 True 2210 mRNA 0.46 7 6227605 6275310

Neighbor

gene id symbol gene type direction distance location
impa2 impa2 coding downstream 2005 6211898 ~ 6225600 (-)
LOC103047759 LOC108431241,LOC108271803,LOC107655677 coding downstream 21136 6002319 ~ 6206469 (-)
LOC103042957 ralaa,rala,LOC103042957,LOC107565693,LOC108268083,LOC101477841 coding downstream 317425 5901238 ~ 5910180 (-)
cdk13 cdk13,LOC107713640,LOC107566913 coding downstream 332070 5881559 ~ 5895535 (-)
rmdn1 rmdn1,LOC107729932,LOC107668150,LOC107756855 coding downstream 1340303 4879017 ~ 4887302 (-)
LOC103045308 LOC108431216,LOC108271758 coding upstream 1806 6277116 ~ 6407022 (-)
LOC103026452 NA coding upstream 823928 7099238 ~ 7101459 (-)
lancl2 lancl2 coding upstream 1061418 7336728 ~ 7398583 (-)
LOC103034175 tgfbr1,tgfbr1b,LOC108441711,LOC107757190,LOC105890151,LOC106590284 coding upstream 1154689 7429999 ~ 7514588 (-)
LOC103025816 NA coding upstream 1260668 7535978 ~ 7550381 (-)
G88618 NA non-coding downstream 240204 5986476 ~ 5987401 (-)
G88617 LOC103043891,LOC108431261,LOC107734313 non-coding downstream 247879 5979088 ~ 5979726 (-)
G88614 NA non-coding downstream 297094 5930011 ~ 5930511 (-)
G88613 NA non-coding downstream 299385 5927689 ~ 5928220 (-)
G88574 NA non-coding downstream 695952 5531426 ~ 5531653 (-)
G88678 NA non-coding upstream 110684 6385994 ~ 6387918 (-)
G88686 NA non-coding upstream 180291 6455601 ~ 6456722 (-)
LOC111193291 NA non-coding upstream 181501 6456811 ~ 6457729 (-)
G88690 NA non-coding upstream 214699 6490009 ~ 6490275 (-)
G88706 NA non-coding upstream 384987 6660297 ~ 6660559 (-)
G88465 NA other downstream 1632280 4595058 ~ 4595325 (-)
G88458 NA other downstream 1661401 4565850 ~ 4566204 (-)
lyrm4 lyrm4 other downstream 2536057 3606430 ~ 3691548 (-)
LOC103033691 LOC108431537,LOC108266640,LOC107600138,LOC107713778,LOC107687503,LOC107683489,LOC107734392 other downstream 2873730 3336557 ~ 3353875 (-)
G88044 pfkp,LOC101472402,LOC102201923,LOC100702375,LOC102790125 other downstream 3940366 2275608 ~ 2287239 (-)
vstm2a vstm2a other upstream 400965 6676275 ~ 6732664 (-)
LOC103026131 LOC108431006 other upstream 828261 7103571 ~ 7215239 (-)
G88779 NA other upstream 842351 7117661 ~ 7118126 (-)
G88789 NA other upstream 966401 7241711 ~ 7242570 (-)
LOC103029706 LOC108429024,LOC108268385,LOC107749226,LOC107685514 other upstream 3509313 9784623 ~ 9854099 (-)

Expression


Co-expression Network