XLOC_000730 (si:ch211-196h16.12)


Basic Information

Item Value
gene id XLOC_000730
gene name si:ch211-196h16.12
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 55002583 ~ 55007223 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00001215
tctgaccgTCGTTCCAGCGTTCTGTTTCTCAGTGATGTGCAAGGGGCTGTCCGCCATCCCCTCCTCATGCCTGGAGAAGGCGAAGGGCATGAGGGTCAAACTCTCCCACCTGGCCGAAAAACAGGACAAACACAGAGTGAATGAGGAGAAGCCGCCGCAGGATCTGGAGTCTCTGCTCAGCAGTAAACTGGGCGTTCAGGCTTTCCGCTGGTTCCTGCGCTCGGAGTTCAGCGAGGAGAATCTGCAGTTCTGGCTGGCCTGTGAGGAGTACAAGAGCTCATCCGGAGCCAAGCGCATCTCCAAAGCCCAGCTGATCTACAAGCAATTCATCAACCCTGACGCTCCACACGAGGTGAATCTGGACAGTGAGACGCGTGAGGCTGTGATGCAGCTGATGGAGGAGCCGGCGGTGGACACGTTTGATGAGGCTCAGCTCCGCATCTTCACCCTGATGGCCAAAGACTCGTTCCCTCGATTCCTGCGCTCGGCCTACTGCCACTAAAGCACTCTCTGATCC

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-121214-351 No description available

Ensembl:

ensembl_id ENSDARG00000028276

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00001215 True 517 mRNA 0.57 5 55002583 55007223

Neighbor

gene id symbol gene type direction distance location
XLOC_000729 NA coding upstream 17286 54959492 ~ 54985297 (+)
XLOC_000728 r3hcc1l coding upstream 44120 54948059 ~ 54958463 (+)
XLOC_000727 golga7ba coding upstream 70670 54908895 ~ 54931913 (+)
XLOC_000726 zfyve27 coding upstream 94760 54889733 ~ 54907823 (+)
XLOC_000725 si:ch211-196h16.5 coding upstream 113082 54865552 ~ 54889501 (+)
XLOC_000731 lgalsla coding downstream 73574 55080797 ~ 55089987 (+)
XLOC_000732 aftpha coding downstream 88091 55095314 ~ 55109914 (+)
XLOC_000733 CU467849.1 coding downstream 121242 55128465 ~ 55128579 (+)
XLOC_000734 mb coding downstream 130720 55137943 ~ 55145085 (+)
XLOC_000735 NA coding downstream 177541 55184764 ~ 55191262 (+)
XLOC_000721 NA non-coding upstream 301828 54698173 ~ 54700755 (+)
XLOC_000715 NA non-coding upstream 389104 54611838 ~ 54613479 (+)
XLOC_000712 NA non-coding upstream 533294 54277243 ~ 54469289 (+)
XLOC_000713 NA non-coding upstream 598436 54401933 ~ 54404147 (+)
XLOC_000741 NA non-coding downstream 307251 55314474 ~ 55579436 (+)
XLOC_000742 NA non-coding downstream 319343 55326566 ~ 55343851 (+)
XLOC_000744 NA non-coding downstream 362294 55369517 ~ 55369839 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000303_00276573_00279229 NA coding CI01000303 null 276483 ~ 279243 (+)