G10903


Basic Information

Item Value
gene id G10903
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035898.1
NCBI id CM008301.1
chromosome length 34292151
location 16181950 ~ 16215622 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU14735
taatacctgactggtaaaattcatacagtgccctccataattattggcacccctggttaagatgtgttctttagcttctcataaattgagttttgttcaaaataatataggaccacgatggaaaaaaagagtaaaatacaacctttaactcaagtgaatttattcagtaggaaaaaaatcccacattaagaaataattatttaacatcaaatcatgtgtgccacaattattagcacccctgatgttaatactttgtacaacccccttttgccaacaaaacagcacctaatcttctcctgtaatgtttcacaagatgggagaatacagaaagagggatctttgaccattcctctttgcacattctctctaaatcatccaacgacctgggtcctctcctctgcactctcctcttcagctcaccccacaggttttcaatggggttgaggtctggggactgagatggccatgggaggaacttgattctgtgtgcggtgaaccatttctgtgtagatttggccacatgtttagggtcattatcttgctgaaagacccagtgacgacccatcttcagctttcgggcagaagccaccagattttgttttaaaatgtcctggtattttagagcattcatgatgccatgcaccctaacaaggttcccagggcctttagaagagaaacaggcccacagcatcactgatcccccgccgtatttcacagtgggcatgaggtgcttttctgcatactcagctcttgtgttacgccagacccacttagagcatttgttgccaaaaagctctatctttgtttcatctgaccaaagcacacggtcccagttgaagtcccagtaccgcttagcaaactccaaacgtttgcgtttatgattgtgagtgagaaatggtttcttccgtgcatgcctcccaaacagcttgttggcatgtagatagcgcctgatggttgttttggagactttgtgaccccaagaagctaccatttgttgcaattctgtaacagtgagctttggagaactttttatttctcttatcatcctccgcaaaataaacttgcgtcctcgtccaggcttgtttaccactgttccagttgttttaaacttcttaataattcctctgacagtagatatggacaggtgtaggcgagtagcgatg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU14735 True 1163 lncRNA 0.43 3 16181950 16215622

Neighbor

gene id symbol gene type direction distance location
gfap gfap coding upstream 9570 16155230 ~ 16172380 (+)
map3k3 map3k3,LOC107674169,LOC107570753,LOC107658467 coding upstream 46576 16090023 ~ 16135374 (+)
limd2 limd2,LOC107721965,LOC107674139,LOC107658411 coding upstream 101256 16046254 ~ 16080694 (+)
LOC103033944 LOC103033944 coding upstream 141738 16037808 ~ 16040212 (+)
rnf113a rnf113a,LOC106606873,LOC107693494,LOC106601610 coding upstream 204917 15965965 ~ 15977033 (+)
meioc NA coding downstream 194893 16410515 ~ 16424926 (+)
LOC111194175 NA coding downstream 726682 16942304 ~ 16946439 (+)
LOC111194187 NA coding downstream 732638 16948260 ~ 16951992 (+)
LOC103039111 tiam1b,LOC108411134,LOC107705640,LOC108278361,LOC107670130,LOC107669892 coding downstream 1958454 18174076 ~ 18215882 (+)
LOC103031729 NA coding downstream 2024796 18240418 ~ 18263534 (+)
G10882 NA non-coding upstream 199372 15979023 ~ 15982578 (+)
G10877 NA non-coding upstream 230774 15950934 ~ 15951176 (+)
G10865 NA non-coding upstream 260520 15863842 ~ 15921430 (+)
G10843 NA non-coding upstream 428682 15751508 ~ 15753268 (+)
G10826 LOC108427385,LOC100528069,LOC108427383,LOC106526789,LOC108274011 non-coding upstream 468550 15671611 ~ 15713400 (+)
G10909 NA non-coding downstream 87081 16302703 ~ 16304584 (+)
G10910 NA non-coding downstream 91406 16307028 ~ 16311890 (+)
G10913 NA non-coding downstream 98197 16313819 ~ 16316489 (+)
G10914 NA non-coding downstream 101006 16316628 ~ 16318015 (+)
G10915 NA non-coding downstream 102534 16318156 ~ 16318422 (+)
LOC107197663 NA other upstream 131025 14801118 ~ 16050925 (+)
ddx42 ddx42 other upstream 146666 16011694 ~ 16035284 (+)
G10879 NA other upstream 221572 15952846 ~ 15960378 (+)
G10838 NA other upstream 412707 15758762 ~ 15769243 (+)
G10825 syt5a,LOC108427381,LOC107658481 other upstream 526612 15650282 ~ 15655338 (+)
ccdc47 ccdc47,LOC107674171,LOC107658463,LOC107729550,LOC107721963 other downstream 9099 16224721 ~ 16300667 (+)
LOC111194200 NA other downstream 923803 17139425 ~ 17143348 (+)
LOC103043893 picalmb,LOC108435293,LOC107726102,LOC107662770,LOC107597534,LOC107729110,LOC107699893,LOC108278317,LOC105903807 other downstream 3197185 19412807 ~ 19444831 (+)
LOC103033739 gkup,LOC108436512,LOC108278261,LOC106612544,LOC105024033,LOC107709108,LOC107717281,LOC107657260,LOC107586304 other downstream 4747427 20963049 ~ 20990064 (+)
trnan-guu NA other downstream 4760582 20976204 ~ 20976277 (+)

Expression


Co-expression Network