G10865


Basic Information

Item Value
gene id G10865
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035898.1
NCBI id CM008301.1
chromosome length 34292151
location 15863842 ~ 15921430 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU14681
aagatgcagagctttcagacctcaaataatgcaaagaaaacaagttcatattagggttgtcacgataccaaaattttgacttcgataccgataccaactgtagtatcacgattctcgataccaaaacgatacttggaagaaaaaaaaacaataaaaatatctgaacataaaatgtttatttttgactgaactggattgaacactgaacaatcggtgcaaacgtttttattctaaaatgaaacatttgtacaaaaaaaaaaaagtttcgttattataaccttaactataacataattatct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU14681 True 300 lncRNA 0.29 3 15863842 15921430

Neighbor

gene id symbol gene type direction distance location
LOC103025681 NA coding upstream 116119 15741172 ~ 15747723 (+)
prmt1 prmt1,LOC107729532,LOC107658485,LOC107689671 coding upstream 585420 15272744 ~ 15278422 (+)
LOC103046681 LOC108427369 coding upstream 729473 15117166 ~ 15134369 (+)
polr3d polr3d coding upstream 842021 15014840 ~ 15021821 (+)
rcn3 rcn3,LOC107730752,LOC107689660,LOC107583008,LOC107554106 coding upstream 858990 14996132 ~ 15004852 (+)
rnf113a rnf113a,LOC106606873,LOC107693494,LOC106601610 coding downstream 44535 15965965 ~ 15977033 (+)
LOC103033944 LOC103033944 coding downstream 116378 16037808 ~ 16040212 (+)
limd2 limd2,LOC107721965,LOC107674139,LOC107658411 coding downstream 124824 16046254 ~ 16080694 (+)
map3k3 map3k3,LOC107674169,LOC107570753,LOC107658467 coding downstream 168593 16090023 ~ 16135374 (+)
gfap gfap coding downstream 233800 16155230 ~ 16172380 (+)
G10843 NA non-coding upstream 110574 15751508 ~ 15753268 (+)
G10826 LOC108427385,LOC100528069,LOC108427383,LOC106526789,LOC108274011 non-coding upstream 150442 15671611 ~ 15713400 (+)
G10822 NA non-coding upstream 577107 15285715 ~ 15286735 (+)
G10720 NA non-coding upstream 631927 15193798 ~ 15231915 (+)
G10706 NA non-coding upstream 700007 15136544 ~ 15163835 (+)
G10877 NA non-coding downstream 29504 15950934 ~ 15951176 (+)
G10882 NA non-coding downstream 57593 15979023 ~ 15982578 (+)
G10903 NA non-coding downstream 260520 16181950 ~ 16215622 (+)
G10909 NA non-coding downstream 381273 16302703 ~ 16304584 (+)
G10910 NA non-coding downstream 385598 16307028 ~ 16311890 (+)
G10838 NA other upstream 94599 15758762 ~ 15769243 (+)
G10825 syt5a,LOC108427381,LOC107658481 other upstream 208504 15650282 ~ 15655338 (+)
G10510 smg1,LOC107729485,LOC107583093 other upstream 1456401 14404403 ~ 14407441 (+)
LOC111193423 arl6ip1,LOC107658451 other upstream 1465147 14314792 ~ 14398695 (+)
G10879 NA other downstream 31416 15952846 ~ 15960378 (+)
ddx42 ddx42 other downstream 90264 16011694 ~ 16035284 (+)
ccdc47 ccdc47,LOC107674171,LOC107658463,LOC107729550,LOC107721963 other downstream 303291 16224721 ~ 16300667 (+)
LOC111194200 NA other downstream 1217995 17139425 ~ 17143348 (+)
LOC103043893 picalmb,LOC108435293,LOC107726102,LOC107662770,LOC107597534,LOC107729110,LOC107699893,LOC108278317,LOC105903807 other downstream 3491377 19412807 ~ 19444831 (+)

Expression


Co-expression Network