G13455


Basic Information

Item Value
gene id G13455
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035898.1
NCBI id CM008301.1
chromosome length 34292151
location 25032901 ~ 25033376 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU18076
tgaacgctaggtgtcagaaacgggcaaaagagtctaaaagcggagagagtgcgcatttctagcacagaaaaacagggcaaaagagtctaaaagcggagagggtgcgcatttctagcgcagaaaaacgggccaaagagtctaaaagcggagagggtgcgcatttctagctcagaaaaacgggccaaagagtctaaaagcggagagggtgcgcatttctagcgcagaaaaacggggcaaaagagtctaaaagcggagagagtgcgcatttctagcacagaaaaacagggcaaaagagtctaaaagcggagagggtgcgca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU18076 True 318 lncRNA 0.49 2 25032901 25033376

Neighbor

gene id symbol gene type direction distance location
LOC103027752 NA coding upstream 50870 24980195 ~ 24982031 (+)
LOC103028424 LOC108425893 coding upstream 159775 24789276 ~ 24873126 (+)
kiaa0753 NA coding upstream 256440 24738891 ~ 24776461 (+)
tbx4 tbx4 coding upstream 474297 24519162 ~ 24558604 (+)
tbx2 tbx2,tbx2b,LOC107685069,LOC107757046 coding upstream 537444 24486822 ~ 24495457 (+)
lipt2 lipt2,LOC107677087 coding downstream 38926 25072302 ~ 25086749 (+)
LOC111194299 NA coding downstream 114901 25148277 ~ 25161641 (+)
eif4h eif4h,LOC107704308 coding downstream 335318 25368694 ~ 25378622 (+)
rffl rffl coding downstream 348785 25382161 ~ 25400864 (+)
LOC103043872 tfdp2,LOC108426935,LOC108277808,LOC107744026,LOC107704305,LOC107680101,LOC107720963 coding downstream 377910 25411286 ~ 25468689 (+)
G13214 NA non-coding upstream 306735 24723838 ~ 24726166 (+)
G13212 NA non-coding upstream 318938 24713326 ~ 24713963 (+)
G13197 NA non-coding upstream 345150 24647283 ~ 24687751 (+)
G13167 NA non-coding upstream 634249 24393299 ~ 24398652 (+)
G13159 NA non-coding upstream 677931 24345710 ~ 24354970 (+)
G13458 NA non-coding downstream 13962 25047338 ~ 25049073 (+)
G13462 NA non-coding downstream 24617 25057993 ~ 25058489 (+)
G13491 NA non-coding downstream 86113 25119489 ~ 25120520 (+)
G13504 NA non-coding downstream 149929 25183305 ~ 25183545 (+)
G13514 NA non-coding downstream 197606 25230982 ~ 25231843 (+)
G13237 NA other upstream 175879 24855933 ~ 24857022 (+)
ccdc9 ccdc9,LOC107548566,LOC107664938 other upstream 310225 24700842 ~ 24722676 (+)
G13067 NA other upstream 1177548 23853998 ~ 23855353 (+)
oaf oaf,oafa,LOC107696006,LOC107709135,LOC107586231,LOC107657251,LOC107717291 other upstream 2515121 22473652 ~ 22517780 (+)
spa17 spa17,LOC107709112,LOC107586300,LOC107657238,LOC107717271 other upstream 2647929 22300996 ~ 22384972 (+)
G13445 spcs2,LOC107677086 other downstream 19137 25052513 ~ 25056103 (+)
LOC103040166 LOC103040166,LOC108426893 other downstream 213620 25246996 ~ 25339435 (+)
LOC103045399 LOC108426937,LOC108277812 other downstream 528257 25561633 ~ 25642743 (+)
mfrp mfrp other downstream 627522 25660898 ~ 25673236 (+)
LOC103023549 gpr171 other downstream 755208 25788584 ~ 25795084 (+)

Expression


Co-expression Network