G13212


Basic Information

Item Value
gene id G13212
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035898.1
NCBI id CM008301.1
chromosome length 34292151
location 24713326 ~ 24713963 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU17748
tctctctctctctcactctctctgtatctctctctctctctctctgtatctctctctctctctctctgtatctctctctctctctctctctctctcaagctaAAAGTCATTGAAAATCAGTTGGGTAGTGTCTGTATAAGACTGGACACAGTGCAGCTCACAGCAGGGGGACATGgattattacagtttttgatAATGGGTGCTATATTTATGGGGCAGTTTATTTTTGTAGTTATATGGGCACCTAATGTTTCTTGATCCACAGTGAACGTTTACCGGGAATAcatcataaaaggcattaccacccacagaggacagtgcagtgggttaTAATGACAAGCAGCATCTGGTTGGATTTTCCATGTTAACTGGTATGAGAATCTGCCAGAAATCAcatcaaaacactgaataaaaaaacaaaacaaagaatacactactgcaacaaaatgaaaaataaattttattactgcatacaatatgatatggtacacccctaactgagatattaaataatacaagaattttatcagatttacagtaacagaagtcagtgatccaaaatgtcatgatactaatattaaattatttattatc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU17748 True 594 lncRNA 0.50 2 24713326 24713963

Neighbor

gene id symbol gene type direction distance location
tbx4 tbx4 coding upstream 154722 24519162 ~ 24558604 (+)
tbx2 tbx2,tbx2b,LOC107685069,LOC107757046 coding upstream 217869 24486822 ~ 24495457 (+)
bcas3 bcas3,LOC107743646,LOC107664928 coding upstream 239780 23949391 ~ 24473546 (+)
LOC103047782 phykpl,LOC108439974,LOC108277665,LOC107743705,LOC107683819,LOC107585546 coding upstream 803650 23896492 ~ 23909676 (+)
rnf26 rnf26 coding upstream 963196 23745184 ~ 23750130 (+)
kiaa0753 NA coding downstream 24928 24738891 ~ 24776461 (+)
LOC103028424 LOC108425893 coding downstream 75313 24789276 ~ 24873126 (+)
LOC103027752 NA coding downstream 266232 24980195 ~ 24982031 (+)
lipt2 lipt2,LOC107677087 coding downstream 358339 25072302 ~ 25086749 (+)
LOC111194299 NA coding downstream 434314 25148277 ~ 25161641 (+)
G13197 NA non-coding upstream 25575 24647283 ~ 24687751 (+)
G13167 NA non-coding upstream 314674 24393299 ~ 24398652 (+)
G13159 NA non-coding upstream 358356 24345710 ~ 24354970 (+)
G13142 NA non-coding upstream 453909 24257714 ~ 24259417 (+)
G13139 NA non-coding upstream 460955 24249739 ~ 24252371 (+)
G13214 NA non-coding downstream 9875 24723838 ~ 24726166 (+)
G13455 NA non-coding downstream 318938 25032901 ~ 25033376 (+)
G13458 NA non-coding downstream 333375 25047338 ~ 25049073 (+)
G13462 NA non-coding downstream 344030 25057993 ~ 25058489 (+)
G13491 NA non-coding downstream 405526 25119489 ~ 25120520 (+)
G13067 NA other upstream 857973 23853998 ~ 23855353 (+)
oaf oaf,oafa,LOC107696006,LOC107709135,LOC107586231,LOC107657251,LOC107717291 other upstream 2195546 22473652 ~ 22517780 (+)
spa17 spa17,LOC107709112,LOC107586300,LOC107657238,LOC107717271 other upstream 2328354 22300996 ~ 22384972 (+)
G12362 bco2b,LOC108436497,LOC107586303,LOC107657247 other upstream 3249677 21459850 ~ 21463649 (+)
trnan-guu NA other upstream 3737049 20976204 ~ 20976277 (+)
G13237 NA other downstream 141970 24855933 ~ 24857022 (+)
G13445 spcs2,LOC107677086 other downstream 338550 25052513 ~ 25056103 (+)
LOC103040166 LOC103040166,LOC108426893 other downstream 533033 25246996 ~ 25339435 (+)
LOC103045399 LOC108426937,LOC108277812 other downstream 847670 25561633 ~ 25642743 (+)
mfrp mfrp other downstream 946935 25660898 ~ 25673236 (+)

Expression


Co-expression Network