G13462


Basic Information

Item Value
gene id G13462
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035898.1
NCBI id CM008301.1
chromosome length 34292151
location 25057993 ~ 25058489 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU18083
GTTAATGTATTTGTAGTGTTAGttgttttagctctgtggtcttAACCTGAACCTGCTGGCGTTGCCTCTCTTCCCaggcagttagctaactagctagctagctaacgataGCTAAACAGTGGCCATAGTTAAAATGGAATTGGAATTACTTTTGAGAACGACcgtaatgcaaataatatttactgtaaccgaagctttaACGTAGAAGCATTGTCCGGTCATTAAGTCAATGCACTAACCAGAGCTAGGCTGATAAGCCAATCTAAGCTAAATCAAAGAACCGTCTTTGGCTAAATTCGCTAAGCTAGCGTTAAGTTATATAAGTTTGTGGCACCCACAATTAACCTAGGCAACTGGGGGCAATATCAAGTGCATTTTGAATAgcctgaagaagtaagtttatgttaatattacataaataaggcaatttaaaatagtttgttgtgggaaaacatttattaaaatagcttaatatgatgtgtgagaattaaaacggc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU18083 True 497 lncRNA 0.47 1 25057993 25058489

Neighbor

gene id symbol gene type direction distance location
LOC103027752 NA coding upstream 75962 24980195 ~ 24982031 (+)
LOC103028424 LOC108425893 coding upstream 184867 24789276 ~ 24873126 (+)
kiaa0753 NA coding upstream 281532 24738891 ~ 24776461 (+)
tbx4 tbx4 coding upstream 499389 24519162 ~ 24558604 (+)
tbx2 tbx2,tbx2b,LOC107685069,LOC107757046 coding upstream 562536 24486822 ~ 24495457 (+)
lipt2 lipt2,LOC107677087 coding downstream 13813 25072302 ~ 25086749 (+)
LOC111194299 NA coding downstream 89788 25148277 ~ 25161641 (+)
eif4h eif4h,LOC107704308 coding downstream 310205 25368694 ~ 25378622 (+)
rffl rffl coding downstream 323672 25382161 ~ 25400864 (+)
LOC103043872 tfdp2,LOC108426935,LOC108277808,LOC107744026,LOC107704305,LOC107680101,LOC107720963 coding downstream 352797 25411286 ~ 25468689 (+)
G13458 NA non-coding upstream 8920 25047338 ~ 25049073 (+)
G13455 NA non-coding upstream 24617 25032901 ~ 25033376 (+)
G13214 NA non-coding upstream 331827 24723838 ~ 24726166 (+)
G13212 NA non-coding upstream 344030 24713326 ~ 24713963 (+)
G13197 NA non-coding upstream 370242 24647283 ~ 24687751 (+)
G13491 NA non-coding downstream 61000 25119489 ~ 25120520 (+)
G13504 NA non-coding downstream 124816 25183305 ~ 25183545 (+)
G13514 NA non-coding downstream 172493 25230982 ~ 25231843 (+)
G13520 NA non-coding downstream 235980 25294469 ~ 25298227 (+)
G13545 NA non-coding downstream 342531 25401020 ~ 25403118 (+)
G13445 spcs2,LOC107677086 other upstream 1890 25052513 ~ 25056103 (+)
G13237 NA other upstream 200971 24855933 ~ 24857022 (+)
ccdc9 ccdc9,LOC107548566,LOC107664938 other upstream 335317 24700842 ~ 24722676 (+)
G13067 NA other upstream 1202640 23853998 ~ 23855353 (+)
oaf oaf,oafa,LOC107696006,LOC107709135,LOC107586231,LOC107657251,LOC107717291 other upstream 2540213 22473652 ~ 22517780 (+)
LOC103040166 LOC103040166,LOC108426893 other downstream 188507 25246996 ~ 25339435 (+)
LOC103045399 LOC108426937,LOC108277812 other downstream 503144 25561633 ~ 25642743 (+)
mfrp mfrp other downstream 602409 25660898 ~ 25673236 (+)
LOC103023549 gpr171 other downstream 730095 25788584 ~ 25795084 (+)
G14047 NA other downstream 1951059 27009548 ~ 27040529 (+)

Expression


Co-expression Network