G109708


Basic Information

Item Value
gene id G109708
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035909.1
NCBI id CM008312.1
chromosome length 44161018
location 8553410 ~ 8555795 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU148238
agcaaGAGAGACTAAATGAGCCAAGCCATGTGGGTGAAGGGTAAAGCCAGATTTTATGAATGGACTGTTTAAAGGAGCCCTCTGATTGGCCAGTCATGTGGGTCAGTCTATCTGTAGTGAAATGTGACACCTTTATCACTTCtgtggattattatttttacataatcCTTTAGATGTCATGAATTCCTTTATAGTtgttaagttatttaagtttttgcttttttttattaacaagaAAATGATCATGAAGCTTTTTAATGATCagtatctgaaaaaaataagagaacactaaaccaataaatagcaaaatcagagaaactgattttgctatttattggtttataaattctgaataaaaagattgtaatttaaagcatttatttgcagaaaatgagaaatggttgaaataacaaaaaagatgcagagctttcagacctcaaataatgcaaaaaaaa

Function

NR:

description
PREDICTED: kinesin-like protein KIF13A isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU148238 True 455 lncRNA 0.30 2 8553410 8555795

Neighbor

gene id symbol gene type direction distance location
LOC103041643 LOC108436449,LOC107749392,LOC107678319 coding upstream 50845 8419098 ~ 8502565 (+)
LOC103042259 NA coding upstream 164226 8381120 ~ 8389184 (+)
arpc2 arpc2,LOC106575630,LOC106574678 coding upstream 182025 8353176 ~ 8371385 (+)
inha inha,LOC107586362 coding upstream 528837 8021047 ~ 8024573 (+)
obsl1 NA coding upstream 607271 7910585 ~ 7946139 (+)
LOC103021389 LOC108436447,LOC103363665,LOC106926458,LOC106956952 coding downstream 49189 8604984 ~ 8610336 (+)
LOC103044816 LOC108412428 coding downstream 144051 8699846 ~ 8703563 (+)
LOC103040732 NA coding downstream 192261 8748056 ~ 8759638 (+)
wbp4 NA coding downstream 225626 8781421 ~ 8786723 (+)
LOC103042871 LOC103042871 coding downstream 236616 8792411 ~ 8798881 (+)
G109691 NA non-coding upstream 76037 8399767 ~ 8477373 (+)
G109666 NA non-coding upstream 364836 8184650 ~ 8188574 (+)
G109661 NA non-coding upstream 401030 8104297 ~ 8152380 (+)
G109651 NA non-coding upstream 504024 8048492 ~ 8049386 (+)
G109650 NA non-coding upstream 505369 8046942 ~ 8048041 (+)
G109709 NA non-coding downstream 55759 8611554 ~ 8640836 (+)
G109726 NA non-coding downstream 97681 8653476 ~ 8667907 (+)
G109751 NA non-coding downstream 112699 8668494 ~ 8669506 (+)
G109753 NA non-coding downstream 177706 8733501 ~ 8734783 (+)
G109765 fbxl3,LOC107750836,LOC106513965,LOC107549764,LOC107703114 non-coding downstream 184267 8740062 ~ 8740589 (+)
G109669 LOC108438163 other upstream 353433 8196970 ~ 8199977 (+)
igfbp2 LOC108438161 other upstream 428538 8092279 ~ 8124872 (+)
G109613 NA other upstream 691978 7860820 ~ 7861432 (+)
LOC103043571 NA other upstream 853104 7697110 ~ 7700306 (+)
gbx2 gbx2,LOC107596335,LOC103389863 other upstream 1104420 7441969 ~ 7448990 (+)
LOC103038228 pbx1,pbx1b,LOC108272157,LOC108443834,LOC104918287,LOC107677498 other downstream 960680 9516475 ~ 9630237 (+)
G110492 trak2,LOC108430857,LOC107746594,LOC108271640,LOC107582328 other downstream 2409070 10964865 ~ 10973269 (+)
G110694 LOC108444448 other downstream 3793325 12349120 ~ 12835727 (+)
G110974 lrrc8db,LOC108413222,LOC108272026,LOC107749977,LOC107698886,LOC107730703,LOC107555394,LOC107564626 other downstream 5478302 14034097 ~ 14047930 (+)
G111146 hs2st1b,LOC108427652,LOC107593177,LOC107694133,LOC107740348,LOC107679861,LOC107751310 other downstream 6201598 14757393 ~ 14761826 (+)

Expression


Co-expression Network