CI01000018_06352445_06352675


Basic Information

Item Value
gene id CI01000018_06352445_06352675
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000018
NCBI id null
chromosome length 7078422
location 6352445 ~ 6353162 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000018_06352445_06352675.mRNA
GTCTCCTTTTGGAAACACCCTATACTGAACCCAACGGTGACGTACACGAAACCATCGTTGCGGGAGAACGTACACACATCCCTGAGCGGACTGGACGTCCTGAATGCGATATGTGAGGTCAGTCGATCGTCTAAACTGTTAAAAGACACCATTGGTCAGGGAGATCTCAGAGAAAGGCGCGAGAGGGGATGGTCATGCAGAGGTGACAGGCACATATCCCGTCAGATTTGACCGGATCATGCATTTGGCTAGCAGGTGAACCCACGCTAAAATGATCATGAGTATGAAAGGCCCTGAACAAAACATTCAGATTTATAGATTTAGGAATACACAGAAAGAAAATGTATAAATATTGTCAGCATGGCATAATGGAAAACTGCATTGACGCTTAAAGGTAAAAAAGAAAAAGAAAAAAAGACAACCTTATGATATCAATTCCTAAAGGGTCAGAGCTATTTTACAACATATTTCGCTAGTGTAACGAGGTTATCTGGTGTTTGGCACATGCTGTAACAAACAAACAAGCAAAAAAAGGTTAGTATTACACACATAGTAACAGCCATTTTGTGGTGACTTCCCTTAAACCGTTAATTATTATTACTGCACACCAACCAGTGTTGGTGTTTTAATTATGTATCATGTGAAATTGGAACCATCACTACGCATTTCAAACCTAAAATCACATCTTGAGAAGGCTTTAGAAGTTCAGTCGAAGCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000018_06352445_06352675.mRNA True 718 mRNA 0.41 1 6352445 6353162

Neighbor

gene id symbol gene type direction distance location
CI01000018_06253286_06254071 BHLHE22 coding upstream 97529 6252701 ~ 6254916 (+)
CI01000018_06243205_06245283 NA coding upstream 106624 6243007 ~ 6245821 (+)
CI01000018_06228066_06234330 NA coding upstream 117867 6227350 ~ 6234578 (+)
CI01000018_06143719_06147236 YTHDF3 coding upstream 204863 6143719 ~ 6147582 (+)
CI01000018_06089733_06092218 NA coding upstream 260082 6089733 ~ 6092363 (+)
CI01000018_06365094_06367593 MTFR1 coding downstream 11932 6365094 ~ 6367593 (+)
CI01000018_06386938_06390509 NA coding downstream 33055 6386217 ~ 6390602 (+)
CI01000018_06407142_06414203 DNAJC5B, DNJC5 coding downstream 53248 6406410 ~ 6414299 (+)
CI01000018_06417005_06423657 TRIM55, TRIM55B coding downstream 63843 6417005 ~ 6423837 (+)
CI01000018_06464987_06470722 PCYT1BA, PCYT1B coding downstream 111825 6464987 ~ 6470966 (+)
G106222 NA non-coding upstream 1990 6350172 ~ 6350455 (+)
G106169 NA non-coding upstream 69241 6282921 ~ 6283204 (+)
G106136 NA non-coding upstream 100587 6251511 ~ 6251858 (+)
G105870 NA non-coding upstream 103857 6230600 ~ 6248588 (+)
G106235 NA non-coding downstream 78244 6431406 ~ 6431611 (+)
G106239 NA non-coding downstream 84700 6437862 ~ 6438089 (+)
G106255 NA non-coding downstream 105143 6458305 ~ 6458518 (+)
G106160 NA non-coding downstream 138081 6491243 ~ 6491745 (+)
G106150 NA non-coding downstream 192687 6545849 ~ 6547164 (+)
CI01000018_05217404_05218896 NA other upstream 1129829 5216452 ~ 5222616 (+)
G104670 NA other upstream 1592677 4755801 ~ 4759768 (+)
CI01000018_04368179_04375192 NA other upstream 1979033 4368179 ~ 4375866 (+)
G104258 NA other upstream 2660926 3691089 ~ 3691519 (+)
CI01000018_01924489_01985310 SEMA5A other upstream 4367134 1924489 ~ 1985311 (+)
G106429 NA other downstream 528449 6881611 ~ 6886325 (+)

Expression


Co-expression Network