G106169


Basic Information

Item Value
gene id G106169
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000018
NCBI id null
chromosome length 7078422
location 6282921 ~ 6283204 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU120678
TGTAAAGTCCCATATCAAATCATTAATGGACGACACTTGAGATACCAAAGACAAACTCATTCTAATTTTTTATCAGCTTTTGCTTTAAAACGTATATCAAACTTATATTAAATATTAAACCAATCCAATACAAAATGTCTGACCTAATACTGCAATATAAAAGCATTTTCTTCGAGGAAGCGTGAGCAGACTAATTGAAATGGTAATGAAGTGAGCAATATTACAGCACTGATATTCAAACACAACATAAACTACAGCAGACAGTTACCACGGGGCACACCAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU120678 True 284 lncRNA 0.33 1 6282921 6283204

Neighbor

gene id symbol gene type direction distance location
CI01000018_06253286_06254071 BHLHE22 coding upstream 28005 6252701 ~ 6254916 (+)
CI01000018_06243205_06245283 NA coding upstream 37100 6243007 ~ 6245821 (+)
CI01000018_06228066_06234330 NA coding upstream 48343 6227350 ~ 6234578 (+)
CI01000018_06143719_06147236 YTHDF3 coding upstream 135339 6143719 ~ 6147582 (+)
CI01000018_06089733_06092218 NA coding upstream 190558 6089733 ~ 6092363 (+)
CI01000018_06352445_06352675 NA coding downstream 69241 6352445 ~ 6353162 (+)
CI01000018_06365094_06367593 MTFR1 coding downstream 81890 6365094 ~ 6367593 (+)
CI01000018_06386938_06390509 NA coding downstream 103013 6386217 ~ 6390602 (+)
CI01000018_06407142_06414203 DNAJC5B, DNJC5 coding downstream 123206 6406410 ~ 6414299 (+)
CI01000018_06417005_06423657 TRIM55, TRIM55B coding downstream 133801 6417005 ~ 6423837 (+)
G106136 NA non-coding upstream 31063 6251511 ~ 6251858 (+)
G105870 NA non-coding upstream 34333 6230600 ~ 6248588 (+)
G105863 NA non-coding upstream 67311 6215337 ~ 6215610 (+)
G105848 NA non-coding upstream 90530 6191005 ~ 6192391 (+)
G106222 NA non-coding downstream 66968 6350172 ~ 6350455 (+)
G106235 NA non-coding downstream 148202 6431406 ~ 6431611 (+)
G106239 NA non-coding downstream 154658 6437862 ~ 6438089 (+)
G106255 NA non-coding downstream 175101 6458305 ~ 6458518 (+)
G106160 NA non-coding downstream 208039 6491243 ~ 6491745 (+)
CI01000018_05217404_05218896 NA other upstream 1060305 5216452 ~ 5222616 (+)
G104670 NA other upstream 1523153 4755801 ~ 4759768 (+)
CI01000018_04368179_04375192 NA other upstream 1909509 4368179 ~ 4375866 (+)
G104258 NA other upstream 2591402 3691089 ~ 3691519 (+)
CI01000018_01924489_01985310 SEMA5A other upstream 4297610 1924489 ~ 1985311 (+)
G106429 NA other downstream 598407 6881611 ~ 6886325 (+)

Expression


Co-expression Network