G106136


Basic Information

Item Value
gene id G106136
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000018
NCBI id null
chromosome length 7078422
location 6251511 ~ 6251858 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU120639
CTATAGGCCTAGTTGTTTTGTAAATCTGAAATTAGCGAAACATGTAGGTTACTCATCCAACGTTGTTTCGTATTTTCACGTTGTCTTTGTATTACTGTGTTTTAATAGGCTATATTTGTCATAATATTTGTCATAAATATTAAACGTTTCGGTGAGTCTGTCCGAATGTTTAATAATGTGCGCAGTCTATCTGAGACCATGTGGCACAGGACAGTAATTGCAAAAACATTTACCACATCACGAGCTACACCTGTGCGTTTTATGGTTTACGCTTTATAGTGCGGTTTTTAACCTTGTTAGGCTACTGCAGTGTAATAATATGAAATTATGAATATGAAATATGAATAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU120639 True 348 lncRNA 0.34 1 6251511 6251858

Neighbor

gene id symbol gene type direction distance location
CI01000018_06243205_06245283 NA coding upstream 5690 6243007 ~ 6245821 (+)
CI01000018_06228066_06234330 NA coding upstream 16933 6227350 ~ 6234578 (+)
CI01000018_06143719_06147236 YTHDF3 coding upstream 103929 6143719 ~ 6147582 (+)
CI01000018_06089733_06092218 NA coding upstream 159148 6089733 ~ 6092363 (+)
CI01000018_06045598_06051674 LIPIB coding upstream 199529 6045251 ~ 6051982 (+)
CI01000018_06253286_06254071 BHLHE22 coding downstream 843 6252701 ~ 6254916 (+)
CI01000018_06352445_06352675 NA coding downstream 100587 6352445 ~ 6353162 (+)
CI01000018_06365094_06367593 MTFR1 coding downstream 113236 6365094 ~ 6367593 (+)
CI01000018_06386938_06390509 NA coding downstream 134359 6386217 ~ 6390602 (+)
CI01000018_06407142_06414203 DNAJC5B, DNJC5 coding downstream 154552 6406410 ~ 6414299 (+)
G105870 NA non-coding upstream 2923 6230600 ~ 6248588 (+)
G105863 NA non-coding upstream 35901 6215337 ~ 6215610 (+)
G105848 NA non-coding upstream 59120 6191005 ~ 6192391 (+)
G105846 NA non-coding upstream 73737 6177559 ~ 6177774 (+)
G106169 NA non-coding downstream 31063 6282921 ~ 6283204 (+)
G106222 NA non-coding downstream 98314 6350172 ~ 6350455 (+)
G106235 NA non-coding downstream 179548 6431406 ~ 6431611 (+)
G106239 NA non-coding downstream 186004 6437862 ~ 6438089 (+)
G106255 NA non-coding downstream 206447 6458305 ~ 6458518 (+)
CI01000018_05217404_05218896 NA other upstream 1028895 5216452 ~ 5222616 (+)
G104670 NA other upstream 1491743 4755801 ~ 4759768 (+)
CI01000018_04368179_04375192 NA other upstream 1878099 4368179 ~ 4375866 (+)
G104258 NA other upstream 2559992 3691089 ~ 3691519 (+)
CI01000018_01924489_01985310 SEMA5A other upstream 4266200 1924489 ~ 1985311 (+)
G106429 NA other downstream 629753 6881611 ~ 6886325 (+)

Expression


Co-expression Network