G106239


Basic Information

Item Value
gene id G106239
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000018
NCBI id null
chromosome length 7078422
location 6437862 ~ 6438089 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU120749
CAATCGCGTGCCTCATATTTGCTTTAGACAGTCACAGAAACACTGCGCAATGTATATAAACAGTAAATTCAGTTTAAAATTCAATTACTCTTCGTTTGAGAGTAAAAATGTCAAATGCTGACAGAAAACGTGACAATTTGAGTGAAGAAGAGATCGTTTCATTCTTACCTTTATAGTCCAAAATGTCCATTCAGTATAAACTCGATAGTACAGTCGGCAATAAAGGAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU120749 True 228 lncRNA 0.35 1 6437862 6438089

Neighbor

gene id symbol gene type direction distance location
CI01000018_06417005_06423657 TRIM55, TRIM55B coding upstream 14025 6417005 ~ 6423837 (+)
CI01000018_06407142_06414203 DNAJC5B, DNJC5 coding upstream 23563 6406410 ~ 6414299 (+)
CI01000018_06386938_06390509 NA coding upstream 47260 6386217 ~ 6390602 (+)
CI01000018_06365094_06367593 MTFR1 coding upstream 70269 6365094 ~ 6367593 (+)
CI01000018_06352445_06352675 NA coding upstream 84700 6352445 ~ 6353162 (+)
CI01000018_06464987_06470722 PCYT1BA, PCYT1B coding downstream 26898 6464987 ~ 6470966 (+)
CI01000018_06516545_06524220 NA coding downstream 78456 6516545 ~ 6525404 (+)
CI01000018_06530603_06532567 AMER2 coding downstream 91382 6529471 ~ 6533075 (+)
CI01000018_06609697_06619473 NA coding downstream 171236 6609325 ~ 6619971 (+)
CI01000018_06624871_06636641 KIAA1524 coding downstream 186782 6624871 ~ 6636974 (+)
G106235 NA non-coding upstream 6251 6431406 ~ 6431611 (+)
G106222 NA non-coding upstream 87407 6350172 ~ 6350455 (+)
G106169 NA non-coding upstream 154658 6282921 ~ 6283204 (+)
G106136 NA non-coding upstream 186004 6251511 ~ 6251858 (+)
G105870 NA non-coding upstream 189274 6230600 ~ 6248588 (+)
G106255 NA non-coding downstream 20216 6458305 ~ 6458518 (+)
G106160 NA non-coding downstream 53154 6491243 ~ 6491745 (+)
G106150 NA non-coding downstream 107760 6545849 ~ 6547164 (+)
G106276 NA non-coding downstream 111489 6549578 ~ 6555426 (+)
G106300 NA non-coding downstream 154466 6592555 ~ 6592831 (+)
CI01000018_05217404_05218896 NA other upstream 1215246 5216452 ~ 5222616 (+)
G104670 NA other upstream 1678094 4755801 ~ 4759768 (+)
CI01000018_04368179_04375192 NA other upstream 2064450 4368179 ~ 4375866 (+)
G104258 NA other upstream 2746343 3691089 ~ 3691519 (+)
CI01000018_01924489_01985310 SEMA5A other upstream 4452551 1924489 ~ 1985311 (+)
G106429 NA other downstream 443522 6881611 ~ 6886325 (+)

Expression


Co-expression Network